Scophthalmus maximus (turbot): 118317234
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Entry
118317234 CDS
T09850
Symbol
itchb
Name
(RefSeq) itchy E3 ubiquitin protein ligase b
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04120
Ubiquitin mediated proteolysis
smau04144
Endocytosis
smau04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118317234 (itchb)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118317234 (itchb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118317234 (itchb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118317234 (itchb)
04121 Ubiquitin system [BR:
smau04121
]
118317234 (itchb)
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
118317234 (itchb)
Membrane trafficking [BR:
smau04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
118317234 (itchb)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
HECT type E3
118317234 (itchb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
118317234
NCBI-ProteinID:
XP_035501657
LinkDB
All DBs
Position
3:complement(19865066..19889897)
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AA seq
885 aa
AA seq
DB search
MASGVTKPGTSNGYPMKAQLQIIVLSAKLKENKKNWFGPSPYVEVTVEGQSKKTEKCNNT
HSPKWKQPLTVIVTPFSKLSFRVWSHQTLKSDVLLGMATLDISDTLTANDMKISEVVQTL
QLCADRDQSDVVGDLSVCLDGMTVDPEMFAMAKADQHSTSNGESQPNGDPVTRSRDSSPA
LDGVEHRSSPSGRRSVSASGSPLVSSGGSKPLRPPRPSRPPPPTPRRPTSSPASSSNGSA
AADGSDAQSGSDTPVRTPAPAPSPTPDSSPSAGSDRTSTPAYSAGASATLQPNVNPVVNP
RAPAVNSVPLPNGWEQRVDPNGRLYFVDHVEKRTTWERPEPLPPGWERRVDQMGRVYFVD
HITRTTTWQRPTMETVRNYEQWQHQRSQLQGAMQQFNQRFIFGLQDQVSATQNKEFDPLG
PLPHGWEKRTDSNGRVYFVHHPTRSTQWEDPRTQGLLNEKPLPEGWEMRFTVDGIPYFVD
HNRRTTTYIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKINVTRKTLF
EDSFQQIMSFNAQDLRRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKD
NYCLQINPASYINPDHLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPLALKDLE
SIDPEFYNSLMWIKDNDIEECGLEMFFSVDKEILGEVSTHELKPEGGDLQVTEENKEEYI
RLVAEWRLSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLADWQRNTI
YRHYARSSKQIVWFWQFIKEMDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEK
VGKENWLPRSHTCFNRLDLPPYKSYEQMKEKLMFAIEETEGFGQE
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggctagtggagtcaccaagccgggcacttccaatggttaccctatgaaggcacagctg
caaatcatcgtgctatcagcaaaactgaaagagaacaagaaaaattggtttggtcccagt
ccctatgtggaagtgacagtcgaaggccagtccaagaaaacagagaaatgcaacaacacc
cacagccccaaatggaagcagccgctcactgtgattgtgactccattcagcaaactgtcg
tttcgcgtgtggagccaccagaccctgaagtcggatgtgctgctgggcatggccacactg
gacatcagtgacacgctcacagctaatgacatgaaaatctctgaggtggtgcagacccta
cagctgtgtgcagacagggaccagtcagatgtggtgggagacctgtctgtctgcctggac
ggcatgaccgttgaccctgagatgttcgccatggccaaggccgaccagcacagtacatca
aatggggaatcacaacctaacggggatcctgtcacaaggagtcgggacagctctccagcc
ctagatggcgtggagcacaggtcctctcccagtggccggaggtcggtgagcgcctcaggg
tctcccttagtgtcatcagggggctcgaagcctctccgaccacccaggccctccagacct
cctcctccgaccccccgcagaccgacttcttcaccagcgtcttccagcaacggctctgct
gcagccgacggcagcgatgctcagtccggttctgatacaccggtacgaacaccggcccca
gcgccctcaccgaccccggactccagtccatcagctggctcagaccggacctccaccccg
gcctacagcgcaggagcatcagcgaccctacagccaaacgtcaaccccgtggtcaatccc
agggccccggctgtcaactctgtcccgttgcccaatgggtgggaacagcgggtggatccg
aacggccggttgtattttgtcgaccacgtggaaaagagaacaacatgggaacgccctgaa
ccgttgccccctggctgggagcgtcgcgtggaccagatggggcgtgtctactttgttgac
cacatcacacgaaccaccacgtggcagcggcccacgatggagacggtgcgcaactacgag
cagtggcagcaccagcgcagccagctgcagggcgccatgcagcagttcaaccagaggttc
atatttgggctacaagaccaggtgtcagccactcaaaataaggagtttgatcctctcggg
cctttgccacacggatgggagaagagaaccgactccaacggcagggtttattttgtacat
cacccgacacggtccacacagtgggaggacccccggacacaggggttgctcaatgagaag
ccacttccagagggctgggagatgaggttcacagtagacggtatcccctacttcgtagac
cacaacaggagaaccaccacttacatcgaccctcgcactggaaagtcctcacttgaaaac
ggacctcagatcacctatgttcgagacttcaaagccaaagtacagtacttcagattctgg
tgccagcaactgtcgatgcctcaacacatcaagatcaacgtaaccagaaaaaccctgttt
gaggattccttccagcagataatgagcttcaatgctcaagatctgcggaggagactgtgg
atcatcttccctggtgaagaaggcctggattacggtggtgtcgccagggagtggttcttc
ctgttgtcccatgaggtcttgaatcccatgtactgcctgtttgaatatgccggtaaagat
aactactgtctacagatcaaccccgcctcctacatcaaccctgaccacctcaagtatttc
aagttcatcggacgcttcatcgccatggctttattccatggcaagttcatcgacactggg
ttctcgctgccgttttacaagcgcatcctaaacaagccgctggccctcaaagacctggag
tcgatagacccagagttttacaactccctcatgtggatcaaggataacgacatcgaggag
tgcggcctggagatgttcttctccgtcgacaaggagatcctgggggaagtcagcacacac
gagctgaaaccagaagggggagacctccaagtcaccgaggaaaacaaggaggagtacatc
aggctggtagcagagtggaggctgtccagaggagtggaggagcagacgcaggctttcttt
gagggcttcaacgaggtcctccctcagcagtacctgcagtactttgacgccaaagagctg
gaggtgatgctgtgtgggatgcaggagatcgacctggccgactggcagagaaacaccatc
tacagacactacgctcgcagcagcaagcagattgtctggttctggcagttcataaaggag
atggacaacgagaagcggatgaggctgctgcagtttgtcaccggcacctgtcgcctgcct
gtaggagggttcgctgatctgatgggaagcaacggcccccagaagttctgcattgagaag
gtgggaaaagagaactggcttcccagaagtcacacgtgcttcaacagactggacctgccg
ccctacaagagctacgagcagatgaaggagaagctgatgttcgccatcgaggagacggag
ggcttcggacaggagtga
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