Scophthalmus maximus (turbot): 118317856
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Entry
118317856 CDS
T09850
Symbol
fyco1a
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118317856 (fyco1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118317856 (fyco1a)
Membrane trafficking [BR:
smau04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
118317856 (fyco1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
ERM_helical
Motif
Other DBs
NCBI-GeneID:
118317856
NCBI-ProteinID:
XP_035502802
LinkDB
All DBs
Position
13:complement(14289863..14303974)
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AA seq
1516 aa
AA seq
DB search
MATGATVGESQLQRIIRDLHEAVAELEKEFKESGEPITDDSTNLHKFSYKLEYLLQFDQK
EKSTFLGTKKDYWDYFSDCLAKIKGANDGIRFVRSITELKTSVGKGRAFIRYSLVHQRLA
DTLQQCLMNQRVTSDWYYARSPFLKPHLSVDIINHLYELNEVQFDVASRGHDLDASWPSF
ARRTLGGANSPGHMWKPPSRSSSINSLASTYSQHAPEFPSSPDYGQGLLNDLNESLPTCS
EDVSTVEDLRLELDQSELKQRELLGKVHQLGEEAAEFRGIVVELQRQLDVSLAAQEEQQG
LQGELRALRGREEALSREVETLRTRDKATEAEQRLLEEKLAAAEGKNIEFMAKLDGVLNE
KGQQTASYFDSAQKIHEMLDRLKEAEQGKMDAATELEEKKRQAERLEEELRLKGLALKDG
ETKLEASVTSASEEKAKLRAKVEEQCGSLDKLQGALTLREKEASNLQRQLQDLQRSLEER
EKEVDMVKRMAQEDKDKMHKNVGALKETLETEVPALKQQVEKREAELTSTCETLQQLEAK
NQSLNSEKEKLTSSLAELEGNVKEQTTKIEDYKTQCATLMELNEKLLTTVKRNEELKKEM
AENRGVLEDELAALRASEKQLRGQLDDTKMTVDEKEKLLREENRKLDESLQRATMAAKLS
ETTLKRLEQEKQSLREEQDTVKTALGRMQADLKSVHGQIGELEKNLGASRKNEANLQEQL
QTKEAQLVSKEKNLVELQSRLTALETREKELEMAKADAESTCARQTEVIERVTSAKQAME
KSQQQKSAVQRKKNQEVTVKLTVVEGQLELSIQEVSRLQAEILDLRVQAQRSEEEKLKSQ
AQLEVTKAQRDELRTLTEQLKAQTEALNQMHVTELMDCKKKEEVLIEQRDREVAAHAELA
ISAAAIREELSSLKAQNNRLVQENNETRDGLHRANTEMAELGMTICRLSAEKEGAREHGT
GAAARIGELEKEAELLEECVTELRLENNRVREELAQKDTLPETIRELQEQLEKARNQVQS
VKDAGREEMEAVKFQMSSESMNHQTQMKSVNEQLDKVKTQLQEELKTSSMLQAKLSELEA
ENEQYLVLAGEKDAHITKIETTARGSESEIQRLRDAVSGAKEAHLSVQRVCEELKQKLDT
TDADKQSQCLKMTAEIDDLNRTKMNLEERLIELIRDKDALWQKSDALEFEQKLRAEERWW
LVDKEATHCLGCQGQFTWWLRRHHCRLCGRIFCYYCSNNFAMTKHSGKKERCCRDCYTQH
SAVVERFTEAELSPSDTQPPPPGAGPQPPPEPAPYKPTPRVTVSDPSIRSDDGAFDIITE
EEVNGVYDSDATSQTTGGSLDGEQDRQPRQSLDIGTGDVTPDDPEEQVPTVQDSEINLLK
SGEVTMAVPLSIDAISQFGEGSRELFIKSSCYSVITVDVADCGPTISWMFSSEPKSISFS
VVYRESTDTQVEQAKVLIPLTRCNSHKETIQGQLKVRHPGLYTLIFDNSFSRFISKKVFY
QLTMEKPVIYDGSDFP
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atggctaccggggctacggtcggggagagccaactccagaggattatccgagatctgcat
gaggctgttgcagagcttgaaaaggagttcaaggaaagtggggagccaatcacagatgac
agtaccaacctgcacaaattctcctacaagctggagtacctgctacagtttgaccagaag
gaaaagagtacgtttctaggtacaaagaaggactattgggattatttcagtgactgtctg
gctaagatcaaaggggccaacgatgggatccgctttgttagatccatcactgaactgaaa
acatctgtggggaaaggacgagcatttattcgctactccctcgtacatcagcgactggct
gacacgctgcagcagtgcctgatgaaccagagagtcaccagtgactggtactatgcaaga
agcccattcctgaagccccatcttagtgttgacatcatcaatcacctgtacgaactcaat
gaggtccagtttgatgtggcttcacgagggcatgatcttgatgcctcctggcccagtttt
gcaaggaggacactgggaggtgcaaactcacctggccacatgtggaaaccacccagtcgc
agttccagcattaacagtctggccagtacctactcccagcatgcacctgagttcccctct
agtcccgactatggtcagggtctgcttaacgacctgaatgagtccctgcctacctgctcc
gaagatgtcagcacagttgaagaccttcgtctagagctggaccagtcagagctgaagcag
cgagaactcctcggtaaggtgcatcagctgggcgaggaggctgcagagtttaggggcata
gtggtggagctccagaggcagctggatgtgtcgcttgctgcccaagaagagcaacagggc
ttgcagggagaattaagggctcttcgggggagagaggaggccctgtccagagaggtggaa
acacttaggactagggacaaagctacagaggctgaacaacggctgcttgaggaaaagttg
gcagctgctgaggggaagaacatagagttcatggccaagttggacggggttctgaatgag
aagggccagcagacggccagctactttgattcagcacaaaagatacacgagatgctggac
agattgaaagaggcagagcaagggaagatggatgctgctacagagctagaggagaaaaag
aggcaggcagaaaggctagaggaagagctgagattgaaggggttagctttgaaggatggt
gaaacaaaactcgaagcatcagttacatccgcgtctgaggagaaggctaagttgcgggcg
aaagtggaagaacagtgtggttcccttgacaagctgcagggggcattgacattgagagag
aaagaggcgagcaaccttcaaaggcagctgcaagatcttcaaaggtctctagaggaaaga
gagaaagaggtggatatggtgaagaggatggcacaagaagataaagacaaaatgcacaag
aatgttggtgccctaaaagagacgctagaaacagaagtccctgctttaaaacaacaggtt
gaaaagagagaagcagagctaacctccacatgtgagacactgcaacagctagaagccaag
aaccaaagcctcaactcagaaaaggagaaactgacatctagccttgctgaactggagggt
aatgtcaaagagcagaccacaaagatagaagattacaagacacagtgcgccactctaatg
gaactgaacgaaaagttgctgaccacggtgaagagaaatgaagagttgaagaaggagatg
gcggaaaacagaggagtgcttgaagatgaattagcagctttgagagcttctgagaaacag
cttcgaggccagctggatgataccaagatgacagtggatgaaaaagagaagctgttgcgt
gaggagaaccgcaagttggatgagagtctgcagcgagccaccatggctgcaaagctctcg
gagaccacattaaagaggcttgagcaggagaaacagagtctgagagaggagcaggacact
gtgaaaacagctcttggccgcatgcaagcagacctgaagagtgttcacgggcagatagga
gagctggagaagaatttaggagcttcacgcaagaatgaagccaatcttcaagaacagctc
caaaccaaagaggcccagctagtgagtaaagagaagaaccttgttgagctccagtccagg
ttaacagctctggaaaccagggagaaggaacttgagatggccaaagcagacgcagagtca
acctgtgctagacagacagaagtgattgaaagggtgacctcggcaaagcaggcaatggag
aaatctcagcaacagaagagtgctgtccaaagaaagaagaaccaagaagtgaccgtaaaa
ctcactgtggttgagggccagttggagttgagcattcaagaagtttccaggctccaggca
gagatcctggacctcagggtgcaggcgcagaggtctgaggaggaaaagctgaaatcccaa
gcacagctggaggtgaccaaagcccaaagagatgagctcaggactctgacagagcagctt
aaagctcagacagaagcactgaatcagatgcatgtaacagagcttatggattgcaaaaag
aaagaagaggtgctgatagagcagcgtgacagagaagtagccgcccacgccgagttggca
atatctgcagccgcgatccgagaagagttgtccagcctcaaggcacaaaacaacaggctg
gtacaagagaacaacgaaacgcgtgacggtctgcacagggcaaacacagagatggccgag
ttggggatgaccatctgtaggctaagcgcagaaaaagaaggggccagagaacatggtaca
ggcgctgctgccaggattggagagctggagaaagaggcagagttactggaagagtgcgtg
acagaactacgactggagaacaacagagtaagagaggagctggcacagaaggatacactt
ccagagaccatcagggagctccaggagcagctggaaaaggccaggaaccaggtgcagagt
gtcaaagatgccggcagggaggagatggaggctgtcaagttccagatgagctcagagagc
atgaatcatcagacccaaatgaagagtgtgaatgaacagttggacaaggtgaaaacccaa
ctgcaggaggagctgaagacttcatccatgttgcaggctaaactgtctgaattagaggct
gagaacgagcagtacttggtgctggccggtgagaaagatgctcacatcacaaagatagaa
acaactgcacgtgggagtgaaagcgagattcagcgtctgagagacgctgtaagcggagct
aaagaagcacacttgtcagtgcaaagggtttgcgaggaattgaagcagaaacttgacaca
acggacgctgacaagcaaagccagtgcctgaagatgaccgcagagatcgacgacctcaac
agaaccaagatgaaccttgaagagcggctcattgagcttatccgggacaaggacgctctg
tggcagaagtcagatgctttggagtttgagcagaaactgcgagcagaggagcgctggtgg
ttggtagacaaagaggcaactcactgcctcggctgccagggccagttcacctggtggctg
cgcagacatcactgcaggctctgtggtcgcatcttctgctattactgcagcaacaacttt
gcgatgaccaagcacagtgggaagaaggagcgctgctgcagggactgttacacccaacac
agtgcggtagtggagaggttcacagaggcagagttgagtccctcagatacccagcctcct
ccacctggagccggacctcagccacctcctgaaccagccccgtacaaacccactcccaga
gtgacagtgtccgatcccagcatcagatctgatgatggagctttcgacatcatcacagaa
gaggaagtgaatggcgtctatgacagtgatgccacctcgcagaccacaggagggtcactg
gatggagaacaagaccgacagccccggcaatcgctggatataggcacaggagatgtgacg
cctgacgaccctgaagagcaagtccccacggttcaggattccgagatcaaccttctcaaa
tcaggagaagtcacgatggctgttcccctcagcatcgatgccatttctcagtttggtgaa
ggctcccgggaactcttcatcaagtccagctgttacagcgtgataactgtcgacgtggct
gactgtgggccgaccatcagctggatgttttcctctgagcctaaaagcatctccttcagt
gtggtttaccgggaatccactgacactcaggtggaacaggcaaaggtcctgattcctctg
actcgctgcaattcccataaagagacgatccaggggcagctgaaagtccgccatcccggc
ctctacacactcatcttcgacaactcgttctcacggtttatctccaagaaagtcttctac
cagctgaccatggagaaacccgtaatctacgacggaagcgactttccctga
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integrated database retrieval system
