Scophthalmus maximus (turbot): 118318237
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Entry
118318237 CDS
T09850
Symbol
ptprfa
Name
(RefSeq) protein tyrosine phosphatase receptor type Fa isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04514
Cell adhesion molecules
smau04520
Adherens junction
smau04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118318237 (ptprfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118318237 (ptprfa)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
118318237 (ptprfa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smau01009
]
118318237 (ptprfa)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
118318237 (ptprfa)
Protein phosphatases and associated proteins [BR:
smau01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
118318237 (ptprfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
fn3_2
ig
PTP-SAK
Fn3_VIN3
Tc-R-P
DSPc
V-set
Interfer-bind
Y_phosphatase3
PTP-NADK
C2-set_2
PTPlike_phytase
Ig_C17orf99
Fn3_PTPRU
Fn3_ELFN
DUF3465
Motif
Other DBs
NCBI-GeneID:
118318237
NCBI-ProteinID:
XP_035503595
LinkDB
All DBs
Position
7:complement(289532..590197)
Genome browser
AA seq
1822 aa
AA seq
DB search
MDLRFRPLTRGALHFLLLATLVLPSHSESMPGFIKSPDDQTGISGGVASFVCQAVGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRTHRDEAIYECTATNSVGEINTSAKL
TVLEEDQIPHGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEIYWFKDFLPVDISSSNG
RIKQLRSGGTPIRGALQIENSEESDQGKYECVAVNIAGTRYSAPANLYVRDQREVRRVPP
RFSIPPNNHEVMPGGNVNLTCVAVGAPMPYVKWTTGEVELTREEEMPIGRNVLELTNIRQ
SANYTCVAISSLGMIETTAQITVKALPKPPTSFIVTETTATSVTLTWDSGNPEPVSYYVI
QYHAKLSDNGFQEVDGVATTRYSIGGLSPFSEYEFRVMAVNNVGRGPSSGIVDTRTSEQA
PSSPPLHVQARMLSSSTMLVQWEAPEEPNGKIRGYRVYYSSSPNTPLSAWQKHNTDDSQL
TTISGLTTDITYNLRVLGFTSVGDGPPSDVLQIKTQQGVPAQPSGFEAEAELDSRIMLSW
LWPVQDPIISFELLYWEVNNPTDKLRVTFDPAGSYAVDGLKPDTVYKFSLAARSDMGLGV
STQPIEARTAQSMPGAPPRKVEVEALNSTALRVTWKPPLSVKQPGQIRGYQLVYSRLENG
EPHGQPAIVDVSFPEAQEATVIGLLPETTYSLTVAAYTSKGDGARSKAKVVTTTGAVPGK
PTMMISTTIGNTALIQWQPPKEMVGEHLGYQLQYKRAEEDAFTFKDFRKTDDHFTVTGLH
KGATYIFKLCGKNHAGNGEEYVKEISTPEDIPSSYPQNLSVVGLTSTSTQLAWDPPPLAE
RNGKIMRYIVVYRDINSQHNNTNSTTETQMTIQGLQPDTTYDIRVQAFTSKGGGLISPSI
QSRTMSTSMPVFTKNFGVKAVMKTSVLLTWEVPETYKSQVPLKILYNQQSVEVQGNLKRK
LITQLQPDTDYSFVLMSRGNSAGGLQQQVAIRTAPDLLLMKPAPYQHDVDEGGKVTVSLP
SAPAGARVRWYYIVVVPVTPASLSSWESPEDMDIHELLEAGADSNLKRKRRQSQDFLQPY
IAAKLDALPEIFTLGDEKRYNGYYNKPLPGQQQYRCFVLADLRDHESVSDLESQGMFSAS
PFSEPIMVKLHSGMTRHTEDPEMLWVMGPVLAVIVIIIIVIAILLFKSKQERKRTSPAKD
EHMAGVKDSLLAHSSDPVEMRRLNHQTQGSSALSYPNTPRMREHPPIAVSDLADHIERLR
ANDSLRFSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVILTHVDGVPGSDY
INANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTCTIVMMTRLEEKSRVKCDQYWP
SRGTETYGMIQVTMLDTVELATYNVRTFALYKNGSTEKREARQFQFMAWPDHGVPEYPTP
TLAFLRRVKACNPPDAGPMVVHCSAGVGRTGCLIVIEAMLERMKHEKSVDTYGHVTCMRA
QRNYMVQTEEQYMFIYEALLEAATCGNTEVPARNLYAHIQNLTQTPPRETVTTMELEFKK
LASSKAHTSRFISANLPCNKFKNRLVNIMPFESTRVCLQPTRGVEGSDYINGSFIDGYRQ
QKAYMATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFV
VDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKT
KEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDLFQTVKMLRTQRPAMVQTE
DQYQLCYRAALEYLGSFDHYAT
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atggaccttagattcagacctcttaccaggggagctcttcatttcctgctgctggccaca
ctggtgctgccctcccattcagagagcatgcccggcttcatcaagtcccccgatgatcaa
acagggatttcgggaggagtggcttcctttgtatgccaggcagtgggtgagcccaaacct
cgcatcacatggatgaagaaggggaagaaagtcagctctcagcgctttgaggtgatcgag
tttgatgatggctcgggctcagtgctgcgtatccagcctttgaggacccaccgtgacgag
gccatctatgaatgcacagccaccaacagtgtgggcgagatcaacaccagtgcaaagctc
actgtgttagaggaggaccagatcccgcatggtttcccaaccatagacatgggtccccag
ctcaaggttgtggagagaacgcgtactgccacgatgctgtgtgcagccagtggcaaccct
gacccagagatctactggttcaaagactttctacctgtggacataagcagcagcaatggt
cgcataaaacagctgcgttcaggtggtacaccaatcagaggtgcacttcagatcgagaac
agtgaggagtcagaccagggcaagtacgagtgtgtggcagtcaacatcgcagggactcgc
tactctgccccggctaacctatatgttcgagatcaacgggaagttcgccgtgtgcctccc
cgtttctccatcccccccaacaatcatgaagtgatgcccggcggcaatgtcaacctgacc
tgtgtggcagttggagctccaatgccttatgtaaagtggacgaccggtgaggtggagctg
acccgagaggaggagatgcctattggccgcaatgtcctggagctcaccaacatccgccag
tctgccaactacacctgcgtggccatatcctcccttggtatgatcgagaccacagcccag
ataactgtcaaagctctgccaaagccacccacctccttcattgtgacagaaaccacagca
accagtgtcacccttacctgggattctggaaacccagaaccggtgtcctactatgtgatc
cagtaccacgccaaactgtctgacaatggcttccaggaagtagacggagtagccaccacc
cggtatagcatcggcggcctcagccccttttccgaatacgagtttcgtgtcatggctgtg
aacaacgttggccgggggccctctagtggtattgtggacacccgtacaagtgagcaagcc
ccctcatcacctcctcttcatgtccaggcgcgcatgttgagttccagcaccatgctggtc
cagtgggaagctccagaagagcccaacggcaaaattcggggctacagggtctactacagc
tcctcgcccaacaccccactcagcgcctggcagaaacacaacacagatgacagccagctc
accaccatctcaggcctgaccacagatatcacctacaacttgagagtcctgggcttcacc
tctgtgggagatgggcctccctctgatgttctgcagatcaaaacccagcagggagttcca
gcgcaaccatctgggtttgaggccgaggcagaactggattcacgcatcatgttgtcgtgg
ctttggcctgtccaggaccccatcattagctttgaactgctctattgggaggtcaacaac
cctacagacaagcttcgtgtcactttcgacccagcaggctcatatgcagttgatggtctg
aagccggacacagtctacaagttttccctggcagcacgatctgatatgggtttaggagtc
tcaactcagccaattgaggcaaggaccgctcaatccatgcccggagcgcctcccaggaaa
gtggaggtggaggccctcaactccactgccctcagggtgacctggaagcctccgctgtct
gtgaagcagcctggccagatcagaggctaccagctggtctactccaggctagagaacggg
gagcctcacggccagccagccatcgttgatgtttcctttcccgaagcgcaggaggccact
gtaataggtctgcttccggagacaacctactcattgactgtagcagcatacaccagtaaa
ggcgatggagctcgcagcaaggccaaggtggtcaccaccacaggagcagtacctggtaag
cccaccatgatgatcagcaccaccatagggaacactgccttgatccagtggcagcctcca
aaagagatggtgggggagcatctgggataccagctgcagtacaagagagcagaagaggac
gctttcacctttaaagacttcagaaagacagatgaccatttcacagtcaccggcctccac
aagggagccacctacatcttcaaactgtgcggcaaaaaccatgcaggcaacggagaggaa
tatgtaaaggagattagcacccctgaggacattccgagcagctacccccagaatctgagt
gtagtgggcctgacttccacctccacccaactggcctgggacccccctcctctggcagag
aggaacgggaagatcatgaggtacatagtggtgtatcgcgatatcaacagccagcacaac
aacaccaacagtaccacagaaacacagatgaccatccaaggtttgcagcctgacacaacc
tacgacatcagagtccaagcttttaccagtaaggggggaggacttattagccccagtatc
cagagcaggaccatgtcaacctccatgccggtgttcaccaagaactttggagtgaaggct
gtgatgaaaacatctgtgctgctgacctgggaagtgccagaaacctacaaatctcaagta
cctctcaagatcctgtacaaccagcagagtgtggaggtccaggggaacctgaagaggaag
ctgatcactcagctgcagccagatactgattactcatttgtgctgatgagccgggggaac
agtgccggtggcctccagcagcaggtcgccatccgaacagctccagacctgctgttgatg
aaacctgctccctaccaacacgatgtcgacgagggtggtaaagtgacagtcagtctgccc
agtgcccctgccggagcccgtgtcaggtggtactacatagtggttgtccctgtcacccca
gcttctctgagcagctgggagagccctgaagacatggacatacatgagctcctggaggct
ggtgctgacagcaatctgaagagaaagaggagacagagccaggatttcctgcagccgtat
atcgctgccaagctggatgccctgcctgagattttcactttgggagatgagaagagatac
aacggctactacaacaaacccctccctggccagcagcagtatcggtgctttgtcctggct
gacctgagggaccacgagtctgtgagtgacctcgagtctcaggggatgttttcggccagc
ccgttctcagagcccatcatggtgaagctccacagtgggatgacccgacacaccgaggat
ccagagatgctctgggtgatgggtcctgtcctggctgtcatcgtcatcatcatcattgtc
attgctattctactcttcaagagcaaacaagagaggaagagaacgtctccagccaaggat
gagcacatggcaggggtcaaggactcactgctggcccactcctcagatcctgtggagatg
aggagactcaaccaccaaacacaaggttccagtgccctcagttacccgaatactccaagg
atgagggaacatcctcccatcgctgtctctgacctggcagaccacatagagagactcagg
gccaacgacagtctacgcttctctcaggaatacgagtctattgatccaggacagcagttc
acctgggagcactccaacctggaggtcaacaagccaaagaatcgctatgcaaatgtgatt
gcctacgaccactccagggtcatcctcacacatgtggatggagttccaggtagcgactac
atcaatgccaattacattgacggctacaggaagcagaatgcttacattgccacacaaggg
ccactgccggagacactgtctgacttctggaggatggtgtgggagcagagaacctgcacc
atcgttatgatgacccgtctggaggagaagtcacgggtgaagtgtgaccagtactggccc
agtagaggcacagagacatatgggatgattcaggtgaccatgctggacactgtggagctg
gctacgtacaatgtgcgcacattcgccctttataagaatggctcgactgagaagagagag
gcccgacagttccagttcatggcatggcctgaccacggagtgcctgagtatcccacccca
acgctggcatttctacgcagagtcaaggcctgtaaccctccagacgccggacccatggtg
gtccactgcagtgctggcgtgggccggacgggctgcctcattgtcatcgaagccatgctg
gaaaggatgaaacacgagaagtctgtggacacatacggccatgtgacatgcatgcgagct
cagaggaactacatggtgcagacagaggagcagtacatgttcatctacgaggctctactg
gaagctgcgacatgtggcaacacagaagtccccgcccgcaacctttacgcccacatccag
aatctgacccagacccctcccagagagaccgtcaccaccatggaactggagttcaagaaa
ctggccagctccaaagcacatacctcaagattcatcagtgccaacctgccgtgtaacaag
tttaagaaccgcctggtgaacatcatgccttttgagtccacccgcgtctgcctgcagcca
accaggggggtggagggctccgactacatcaacggcagcttcattgacgggtacaggcag
cagaaagcatacatggccacccagggcccgttagctgagaccaccgaggacttctggaga
atgttgtgggaacacaactccaccattgttgtcatgctcacaaagctccgcgagatggga
cgggaaaagtgccaccagtactggcctgccgagcgctccgcacgctaccagtactttgtt
gtggaccccatggctgagtacaacatgcctcagtacatcctgagagagtttaaagtcaca
gatgcgagggacggtcagtcgaggaccattaggcagtttcagttcaccgactggccagag
caaggagtgccaaaaactggggagggattcatcgacttcatcggccaagtccataaaact
aaggagcagtttggacaagatggaccaatcacagtgcactgcagtgctggtgttgggcgg
accggtgtcttcatcaccctgagcatcgtcctggagaggatgagatacgagggagtggtc
gacctcttccagaccgtcaagatgctccgtactcagaggccagccatggtgcagacagag
gaccagtaccagctgtgctaccgggctgctctggagtacctgggaagttttgatcactat
gcaacataa
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integrated database retrieval system
