Scophthalmus maximus (turbot): 118319905
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Entry
118319905 CDS
T09850
Symbol
egf
Name
(RefSeq) pro-epidermal growth factor isoform X1
KO
K04357
epidermal growth factor
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04010
MAPK signaling pathway
smau04012
ErbB signaling pathway
smau04020
Calcium signaling pathway
smau04068
FoxO signaling pathway
smau04510
Focal adhesion
smau04540
Gap junction
smau04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118319905 (egf)
04012 ErbB signaling pathway
118319905 (egf)
04068 FoxO signaling pathway
118319905 (egf)
04020 Calcium signaling pathway
118319905 (egf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118319905 (egf)
04540 Gap junction
118319905 (egf)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118319905 (egf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smau04052
]
118319905 (egf)
Cytokines and neuropeptides [BR:
smau04052
]
Cytokines
Growth factors (RTK binding)
118319905 (egf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
cEGF
DUF5050
EGF_CA
EGF_3
EGF_MSP1_1
Vgb_lyase
EGF
Motif
Other DBs
NCBI-GeneID:
118319905
NCBI-ProteinID:
XP_035506505
LinkDB
All DBs
Position
9:complement(20285578..20303134)
Genome browser
AA seq
1116 aa
AA seq
DB search
MSAATITAALIFFMVQRSGALALGTACWDERLSRAGRNSSCVASQPFLIFGHGKAVHRMD
LDGKNQRRLLAGVGSSILFDFHFREEGVYWADKRTGVIYKASVRGAHKQKLYSSDKHISG
LAVDWIWNSVYWTSREKGKVKRMDLNGKNERTLLRHLTQPSSIVVDPNNRFLFWLSGGMT
PSIQRSDVTGQAKTTLIKIAERLQALSIDQQDKRLFWVQFGLQGESAIASCDYNGNALHI
IDQPLRSQALGITVFLEYLYYTDSSSRVIKQVNKYTGGYSLDVNTKQMAKPPVEIKVVHP
LNQPLADSSFPGCEKLSGNCVNVCANLAEQGVCQCSDGFVLSKQGTYCEDVNECAHWNHG
CSLGCENIPGSFFCTCPKGYALLPDRKTCQEIKPCEGNMTKCGHGCLTTDEGEVCVCPEG
SVLQDDGQACTGCSSTDAGGCSQICTPVTPSRWQCGCLPGYQLHLDGKRCIATGPPPYLL
VANFVDVRRINPDGTGDQTLVEEPRGTIVALDYDPIQNNVYFSSISQKTIERIDLNGGSR
GVVISEDLNSPEGLTVDWVHRRMYWTDKSRSTVDCSSLVGLNRETIVSKGLEKPRGIAVH
PLAKKLFWTDIGAQPVVESASLEGKDRTVIASSDLVSPGGLAIDFTEDRLFWCDQRRGVV
ETAGLDGSDRRILLENQVGRPFDLAVFEDRLWISEREPRQLRSVHKRTGKKLQSIHGNMV
QPASVVVVHPLAKPGADVCLHLNGGCAQVCESKLGFAHCSCLSRYILSADGKSCLPADAA
NGTAESGDGESRDFTFLRGSEPTLFTDKMVSGNSATKKICSVLTISHLTVYVSPSPSDQN
ECYSLRCDVNAQCLHHAGSLTCLCLEGFTGDGQLCVEQETASTWVMTTSSPADVTIRHHN
GNSVESCPSTHESYCLYQGVCFYFPEMESYACNCLSGYMGERCQFSDLEWWELQQAEKEK
RRNVVIAACMVLLVSLLSIAACVTYCYSTRKIFHKQPSVDNVSETSVTDESMSETTSSSV
PRFYMLIENGADGEALPAMGCPRRAVCPSCSSETGDNHVSEESDTLSKHNRGYECSMMSA
VAMEITEPTAHPSSSSSYSCTSFILSQTTSAGSPAS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgcaacgatcacagcagcgctgatcttttttatggtgcaaagatctggagcc
ttggccctcggaacagcgtgctgggatgaacgcctatcgcgagcggggagaaacagcagc
tgtgtggcttcacagcctttcctgatattcggtcacggtaaagccgttcatcggatggac
ctcgatgggaagaaccagaggaggcttttggctggtgtgggaagctcgatcctgttcgac
tttcatttcagagaggagggagtttactgggctgacaaacgcactggggtcatctacaaa
gcatcagtgagaggagcccataaacagaaactgtactcgtctgacaaacacatttcgggc
cttgcggtggactggatttggaacagtgtatattggacaagtcgagaaaagggaaaagtc
aagagaatggatttaaatgggaaaaatgagagaactctactaagacacttgacccaaccg
agttccatagttgttgaccccaataacaggttccttttttggctgtctggtggcatgact
ccgagtatccaaaggtctgatgtgacaggacaggcgaaaactacacttattaagatagca
gagcgactacaagcactgtcgattgaccaacaagacaaaagactgttctgggttcagttt
ggactgcaaggagaaagtgccatcgcctcctgtgattacaacggaaacgcccttcacatc
atagatcagccacttcggtctcaggccctggggataacagtttttctggagtacttgtac
tacactgattcttcatctcgggtgataaaacaagtaaacaagtacactggtggatattcc
ctggatgtgaacacaaagcaaatggcaaaaccccctgttgaaatcaaggtggtacatccc
ctcaaccagccattggccgactcatcatttccaggttgtgagaagctgagtggaaactgt
gtgaacgtgtgcgcaaatctagctgagcaaggggtttgtcagtgcagtgacggctttgtt
ctcagtaagcaaggcacttattgtgaagatgtaaacgaatgtgcccattggaaccatggc
tgctctcttggttgtgaaaacatcccaggctcatttttctgtacatgtcctaaaggatac
gccctcctaccggacaggaagacatgtcaagagatcaaaccatgcgaaggcaatatgacc
aaatgcggccatggatgtctgacaacggacgagggcgaagtatgcgtgtgccctgaggga
tctgtactacaggatgacggacaagcctgtactggctgctcatctacggacgcagggggc
tgcagtcagatctgtacccctgtcaccccgagcaggtggcaatgcggttgtctgccaggc
taccagctccacctggacggcaagcggtgcatcgccactgggccaccaccctatctgcta
gttgctaattttgtagatgtacgaagaattaatcccgacggcactggggatcaaaccctg
gtggaggagcccagaggaacaatcgttgctttggactacgaccccatccagaacaatgtg
tacttctccagcattagccaaaagacaatcgagcggattgatttgaacggtggatccagg
ggggtcgtcatctccgaggatctgaactctccagagggactgacggtcgactgggtccac
cgcaggatgtactggacggacaaaagccggtcgactgttgactgcagttccttggttgga
ctaaacagagaaactattgtgagcaaagggctggaaaaaccaagaggaattgcagttcat
cctctggctaagaagttgttctggactgatataggtgcccagcctgtagtggaaagcgcc
tcattggaaggaaaagaccgaacggtcattgcgagctccgaccttgtgtcacctggcggc
ctggccatcgacttcacggaggatcgtctgttctggtgcgaccaacgcaggggcgtggta
gagacggctggcctggatggctcggaccggcggatcctgttagagaaccaagtaggtcga
ccgttcgacctcgccgtatttgaggacaggctctggatctcggaacgggagccgcggcag
ctgagaagtgtacacaagcggaccgggaagaaactccaaagtatccatggcaacatggtg
caaccagcatcagttgtggtggttcatccccttgctaaaccaggggcagatgtctgcctt
cacctgaatggaggatgtgctcaggtgtgtgagagcaaactgggattcgcccactgctcc
tgtctgtcacgctacatcctgtcagctgatgggaaaagttgcctaccggccgacgctgcg
aacggaacagcagaatctggagacggcgaatccagggattttacgtttctcagaggaagc
gagccgactctcttcacagacaagatggtgtcaggtaacagtgcaacaaaaaagatttgt
tcagttcttacgatttcacatctgactgtttatgtttccccttctccgtcagaccagaat
gagtgttactcactgcgttgtgatgtgaacgcacagtgcctgcatcatgcgggcagcctg
acctgtttgtgtctagagggttttacaggtgatggacagttgtgtgtggagcaggagact
gcatcgacatgggtgatgacgaccagcagccctgctgatgtcactatccggcaccacaac
ggtaactcagtggagagctgcccctccacccacgagtcctactgtctgtaccagggcgtc
tgcttctactttcccgaaatggagtcgtacgcctgcaattgtctctcgggctacatgggg
gaacgctgtcagttcagtgacctggagtggtgggagcttcagcaggccgagaaggagaag
aggagaaacgtggtcatcgcggcctgcatggtgctcctcgtctccctgctctccatcgct
gcatgtgtcacctactgctacagtactagaaaaattttccacaaacagccgtcggtggat
aacgtgagtgagaccagtgtgacagatgagagcatgtcagaaaccacctccagcagtgtg
cctcggttctacatgctgatagaaaacggtgccgatggagaagccctccctgccatggga
tgtcccaggagagccgtgtgtccgtcatgctcttcagagacaggtgacaaccatgtgtct
gaagagtcagacacgttgtccaaacacaacagagggtacgagtgttccatgatgtcggct
gttgccatggagatcactgaacccactgcccacccgtcatcgtcaagctcgtattcctgc
acatccttcatcctctcccagactaccagcgcagggtcacctgcttcctag
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