Shewanella marisflavi: CFF01_00160
Help
Entry
CFF01_00160 CDS
T05400
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
smav
Shewanella marisflavi
Pathway
smav01501
beta-Lactam resistance
smav01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CFF01_00160
01503 Cationic antimicrobial peptide (CAMP) resistance
CFF01_00160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smav03036
]
CFF01_00160
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smav02000
]
CFF01_00160
01504 Antimicrobial resistance genes [BR:
smav01504
]
CFF01_00160
Chromosome and associated proteins [BR:
smav03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CFF01_00160
Transporters [BR:
smav02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CFF01_00160
Antimicrobial resistance genes [BR:
smav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CFF01_00160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
CusB_dom_1
Biotin_lipoyl_2
GPS2_interact
Motif
Other DBs
NCBI-ProteinID:
ASJ95126
UniProt:
A0AAC9TVQ6
LinkDB
All DBs
Position
34415..35575
Genome browser
AA seq
386 aa
AA seq
DB search
MRQIVKIASLVSVALWITGCGQDENQGQSAAAPQSMEVGVVKVVEQPQAIQVELPGRSKA
FLEAEVRPQVTGIITERGFVEGGEVTEGQSLYQIDSSTYRAALVSAEADLARANAGLVSA
KAKAARYKALIKTDAISQQDFDEADALYKEAQANVTVAKAAINTAKINLEYTQVKAPISG
RIGKSSVTAGALVTANQSAALATIQQLDPINVDIAQSSAQLLRLKAKLKQGQLQAADNAD
VRLILEDGTVYEHMGSLRFAEVSVDENTGSVTLRAEFPNPDGVLLPGMYVRAVLNAGTDP
KAILVPQSAITRNTKGQAVAMVIGADNKVEPRVVTTAEVIDHQWRITSGLKVGEQVIVEG
LQKIRPGAPVVAKPLSETQSDKQQQK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaaatagtgaaaattgcctcgttagttagtgtggcgttatggataacaggttgt
ggccaagacgagaaccaaggtcagtctgctgcagcccctcagagtatggaagttggcgtg
gtaaaggttgttgagcaacctcaggctattcaagtggaactaccgggtcgcagcaaagcg
tttcttgaagcggaagtacgcccccaggtcacaggtatcattaccgagcgtggctttgtt
gaagggggagaggtgaccgaaggtcagtcgctctatcaaatcgactcttctacatacagg
gctgctttggttagtgccgaggcggatctggcgagagccaatgccggtttagtatcggct
aaggctaaggctgctagatacaaggcattgattaagacagatgccattagccagcaagat
tttgatgaagccgatgctctttataaagaagctcaggctaatgtgactgtggctaaagcg
gctatcaataccgctaagatcaacctggaatacactcaggtgaaggcgcctatctctggc
cgtatcggtaagtcatcggtgaccgctggtgccctagtgacagccaatcagagtgctgca
ctggcgacgatccagcagttggatcccatcaatgtggatatcgcccagtcaagcgcccag
ttattgcgtttaaaagccaagcttaagcagggccagttgcaggcggccgataacgccgat
gtgcgtctgatcttagaagatggcacagtatatgagcatatggggtctcttagattcgcc
gaagtcagcgtggatgagaataccggttctgtgacgttaagagctgaattccctaatcca
gatggtgttttgcttcctggtatgtatgttcgtgccgtgctcaatgcgggcacagatcct
aaggctatcttggtaccacagtcggcgataacccgtaataccaagggccaggccgtcgcc
atggtgattggtgctgataataaggttgagccaagagtggtaaccaccgctgaggtgatt
gaccatcagtggcgtattaccagtggcctcaaggttggtgagcaggtgattgtcgaaggg
ctgcaaaagattcgtccgggtgctcccgtggtggctaagccgttaagcgagacgcaatca
gacaagcaacaacaaaagtaa
DBGET
integrated database retrieval system
