Shewanella marisflavi: CFF01_00165
Help
Entry
CFF01_00165 CDS
T05400
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
smav
Shewanella marisflavi
Pathway
smav01501
beta-Lactam resistance
smav01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CFF01_00165
01503 Cationic antimicrobial peptide (CAMP) resistance
CFF01_00165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smav02000
]
CFF01_00165
01504 Antimicrobial resistance genes [BR:
smav01504
]
CFF01_00165
Transporters [BR:
smav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CFF01_00165
Antimicrobial resistance genes [BR:
smav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CFF01_00165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ASJ95127
UniProt:
A0AAC9TXC9
LinkDB
All DBs
Position
35585..38734
Genome browser
AA seq
1049 aa
AA seq
DB search
MARFFIDRPIFAWVIAIIVMLAGVLSIMKLPVSQYPSIAPPTVTISAVYPGASAKTMEDT
VTQVIEQRMTGIDHLRYISSTSDSFGNAQITLTFNAEADPDIAQVQVQNKLQLAMPLLPQ
EVQAQGVKVNKSSSGFLMVLGFVSEDGSLDKNDISDYVGSNVLDPMSRVAGVGEIQLFGA
QYAMRIWLDPLKLTQYNLTSLDIIASIREQNAQVSAGQLGGAPSIAGQELNATVTAQSRL
QTPEEFEKIIIKSDTSGAKVFLEDVARVELGAESYSVESFYNGRPAAGIGIKLATGANAL
QTAELVREKVDEMKPFFPQGLEVVYPYDTTPFVEKSIEGVVHTLLEAVVLVFVIMYLFLQ
NFRATIIPTIAVPVVLLGTFAILSATGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
SEEGLSPIEATKKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSVTIVSAMAL
SVMVAIILTPALCATMLKPIAKGHHGIETGFFGWFNRSFDKMTSRYEASVAAMIKRAGRV
MLIYLALTVAVGWIFMRMPTAFLPDEDQGILFTQAILPTNSTQESTKNVMDKVTDFYLNE
TGDSVKSVFSVSGFSFAGSGQNMGIAFIGLKDWSERTGPGQDVNSVAGRAMGMFSQIKEA
FVFAFVPPAVIELGTANGFDFYLQDRNGQGHDKLLEARNMLLGMAAQNPNLVGVRPNGQE
DAPMYRIHVDHAKLRALSIDIDAVNSVLGTAWGGSYVNDFIDRGRVKKVYVQGDAEYRMQ
PEDLDTWYVRNSQGEMVPFSAFATGSWEYGSPRLERFNGLPAMNIQGGTAQGYSTGAAMA
DIEAMVAKLPPGFGVEWNGLSYEERLSGNQAPALYALSILVVFLVLAALYESWSVPFAVI
LVVPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKDFYDKGAGLVDA
TLHAVRVRLRPILMTSLAFGLGVVPLAISSGVGSGSQNAIGTGVLGGMMSSTFLGIFFIP
IFFVIVERIFSKREKKGAAQQAAESPSEE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggctcgttttttcatcgatcgccctatctttgcctgggtgattgcaattattgttatg
ttggccggggtgctttctattatgaagcttcccgtgtctcaatacccgagtatcgcaccg
ccaacagtgacgattagtgctgtttatccaggcgcatctgctaagaccatggaagatact
gtgactcaggtgatcgagcagcgtatgacgggtattgaccatctacgttatatctcgtca
accagtgacagctttggtaatgctcagatcaccttgaccttcaatgccgaggcagatcct
gatatcgctcaggttcaggtgcagaacaagttacaacttgctatgcctctgttacctcaa
gaagtgcaggcgcaaggggttaaggttaacaaatccagctcgggtttcttgatggtattg
ggctttgtttcagaggatggttctctggacaagaatgatatctctgactacgtgggttcc
aatgtcttggatcctatgagtcgtgtcgcgggtgtgggtgagatccagctgtttggtgct
cagtacgccatgcgtatatggctcgacccacttaagctgacgcaatacaacctcaccagc
cttgacatcatagcctcgattcgtgagcagaatgctcaggtatctgccggtcagcttggt
ggggcgccatccattgcgggtcaggagctaaatgctactgtgacagctcagagtcgtctg
cagacgccagaagagtttgagaagattatcatcaagtcggacacttctggtgccaaggtt
ttcctcgaagatgttgcgcgtgtcgagctaggtgcagagagttactcggtcgagtctttc
tataacggccgccctgccgcaggtataggcattaagttggctaccggtgcgaacgccttg
cagaccgccgagctagtgcgtgaaaaagttgatgagatgaaacccttcttcccccaaggg
cttgaagtcgtttacccatatgatacaactcctttcgttgagaaatcgatcgagggcgta
gtgcatactctgttagaagctgtggtcctggtgtttgtgatcatgtacctcttcttgcag
aactttcgcgccaccattatcccgactattgcggtacctgtggtgttgctcggtaccttt
gctatcttgtcggcaaccggcttctcaattaataccctcaccatgttcgctatggtattg
gccatcggtctgctggtggatgatgccatcgtggtggtggagaacgtcgaacgtgtgatg
tcagaagaggggttgagccctattgaggccactaagaagtcgatggatcagatcaccggc
gccttggtgggtatcggtctgacactgtcggcggtatttgtgcctatggcgtttatgtcg
ggctctaccggtgttatctatcgtcagttctctgtgactatcgtatcggcgatggcgcta
tctgtgatggtagcgattattctgacgccggccctgtgtgccaccatgttgaaacctatt
gctaaagggcaccatggcatcgaaactggtttcttcggttggtttaaccgtagcttcgac
aagatgacctcgcgttatgaggcgagtgtcgcggcgatgatcaagcgcgccggacgcgtc
atgttgatctatctggccctgaccgttgctgtgggctggatcttcatgcgcatgccgaca
gccttcttgcccgatgaagaccaaggtattttgtttacccaggctattttgccgaccaac
tcgactcaggaaagcaccaaaaatgtgatggataaggtcactgacttctatctcaatgag
acgggagatagtgttaagtcggtgtttagcgtatcgggcttcagttttgctggtagtgga
caaaacatgggtattgccttcattggcttgaaggattggtcagagcgtactgggcctgga
caggatgtgaattctgttgctggacgagccatgggcatgttctcgcagattaaagaagcc
tttgtatttgccttcgtgccacctgcggtgatcgagctgggtacggcaaacggtttcgat
ttctatctgcaagatagaaatggtcaaggccatgataagctgctcgaagcccgtaacatg
ttgctgggcatggctgcacaaaatccaaacctggtgggcgtgcgtcctaacggtcaggaa
gatgcgcctatgtatcgtattcatgtcgatcacgctaagcttcgcgccttgagcatcgac
atcgacgccgtaaacagtgtcctggggaccgcctggggtggtagctatgtaaatgacttc
atcgatcgtggtcgtgtgaagaaagtttatgtacagggtgatgccgaataccgcatgcag
ccagaagatcttgatacctggtatgtgcgtaatagtcagggcgagatggtaccattctct
gcctttgcaactggcagttgggaatacggttcaccgcgtcttgagcgtttcaacggtcta
cctgcgatgaacatccagggtggtacggctcagggttacagtacgggtgcggctatggct
gacatcgaagctatggtggctaagctaccacctggatttggtgttgagtggaacggcctc
tcttatgaggaacgtctctcgggtaaccaggcgccagccttgtatgccttgtctattctg
gtggtcttcctggtactggcggctctatatgagagctggtctgtacccttcgcggtgatc
ttagtggtaccgctggggattatcggtgccttactggcgatgaatggtcgtggtttgccc
aatgacgtattcttccaggtgggtctgctaacgactgtgggcttggcaaccaagaacgcc
atcctgatcgttgagtttgccaaagacttctacgataagggcgctggattggtggatgcg
actctgcatgcggtgcgggtacgtttgcgtcctatcctgatgacctcgctggccttcggt
cttggtgttgtcccgctggcgatcagttcgggcgtgggttcgggcagtcagaacgccatc
ggtacaggtgtattgggcggtatgatgagttcgaccttcctggggatcttctttatccct
atcttcttcgtgatcgtcgagcgtatctttagtaagcgcgagaaaaagggtgcggcgcaa
caagctgctgagtcaccctctgaagaataa
DBGET
integrated database retrieval system
