Shewanella marisflavi: CFF01_14100
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Entry
CFF01_14100 CDS
T05400
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
smav
Shewanella marisflavi
Pathway
smav01501
beta-Lactam resistance
smav01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CFF01_14100
01503 Cationic antimicrobial peptide (CAMP) resistance
CFF01_14100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smav03036
]
CFF01_14100
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smav02000
]
CFF01_14100
01504 Antimicrobial resistance genes [BR:
smav01504
]
CFF01_14100
Chromosome and associated proteins [BR:
smav03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CFF01_14100
Transporters [BR:
smav02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
CFF01_14100
Antimicrobial resistance genes [BR:
smav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CFF01_14100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
OEP
Biotin_lipoyl_2
CusB_dom_1
SAM_HAT_N
Exo70_N
GH101_dom-5
Motif
Other DBs
NCBI-ProteinID:
ASJ97617
UniProt:
A0AAC9U2B2
LinkDB
All DBs
Position
complement(3177861..3179081)
Genome browser
AA seq
406 aa
AA seq
DB search
MIRIVFPAKHLVVVIVALISLVGCEKTEPKIIPKLVVVEKVSSTNVPLYGNYIGVTQASL
DVEVRARIDGFVEEKSFIEGSAVKKGAVLYRIDNRPYLAVVNRLKANVESQQSALDKAKR
DVDRLRPLYEQDAASQLDFDNALSVLSQAKSSLAASMAELEEAQLELSYTEIKSPISGLV
SRSEVDIGALVGSNGQSLLTRVKQVNPIYVTFNMSALDYLNARRRMTSYSDKKEAETEGK
AVEGFVAITLPDNSAYPYLGDVRFTDPSVNPETGTFQVRAELPNPNKELLPGQYTNVRIK
LDEIDDAVVIPQKATQVEQGGVYVMVVQPDNKVERRFIVIEHQGKMGVVVKSGLRAGELV
IVEGMHRVRHGQLAEPLTQQEYQQREDRAQKEQALKQQALEQEQEQ
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgattagaatagtttttccggcaaaacacttagtcgttgtcattgtggcattaatttct
ttagttggctgcgagaagactgagccgaaaatcattcctaagttagttgttgttgagaaa
gtcagttcaaccaatgtgccactttatggcaactacattggcgtgacacaagcatcactt
gatgtagaggttagggcacgtattgatggttttgttgaagaaaaaagcttcatcgaaggt
agtgcggtaaaaaaaggtgcagtgttatatcgcattgacaatcgaccttatttggcagtg
gtaaatcgtttaaaagccaatgtcgaatcacagcaatcagctttggataaagccaagcgt
gatgtggaccgtttaaggcctttgtatgagcaagatgctgctagtcagctcgattttgat
aatgcgttatcagtgttatcccaagctaaatcaagtcttgcggcaagtatggctgagttg
gaagaagctcagttggagctgagttatacagagattaaatcgccgatatctggtttagtt
agccgttcagaggttgatataggtgcactcgttggcagtaatggtcaatctttgcttact
cgggtaaagcaagttaaccccatctatgtcaccttcaatatgtcggctttagattacctt
aatgcccgtcgtcgcatgacgagttactctgacaagaaagaagccgagaccgaaggtaaa
gccgtcgaaggttttgtggctattaccttacccgacaatagtgcttacccatatttgggg
gatgtgcgctttaccgacccgtcagttaatcctgaaacgggtacctttcaagtaagggct
gagctacccaatcccaataaagagctgctaccaggtcaatataccaatgtacggatcaag
cttgatgagatagatgacgccgtagtgatcccacaaaaggctacccaggtcgaacagggc
ggggtatatgtcatggtggtgcaacctgataataaggtcgagcggcgttttatcgtgata
gagcaccagggtaagatgggggtagtggttaagagtggtttacgcgcgggtgaattggtg
attgttgaaggtatgcaccgcgttcgtcacggtcaactggctgagccattaactcaacaa
gaatatcaacagcgcgaagatcgagctcaaaaagaacaggcgcttaagcagcaagcgtta
gaacaagaacaggagcagtaa
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