Shewanella marisflavi: CFF01_17020
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Entry
CFF01_17020 CDS
T05400
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
smav
Shewanella marisflavi
Pathway
smav00300
Lysine biosynthesis
smav00550
Peptidoglycan biosynthesis
smav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CFF01_17020
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFF01_17020
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smav01011
]
CFF01_17020
Enzymes [BR:
smav01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CFF01_17020
Peptidoglycan biosynthesis and degradation proteins [BR:
smav01011
]
Precursor biosynthesis
Amino acid ligase
CFF01_17020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ASJ98150
UniProt:
A0AAC9U199
LinkDB
All DBs
Position
complement(3870144..3871613)
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AA seq
489 aa
AA seq
DB search
MMLLSDLLAPWFHYAGGESLTHLTLDSREIGQGSVFVALPGHRVDGREFVDKALSQGAVA
ALIHTDDPEQHGQVSQGNGLRIYFFQLQRQLSALASQLYSLGRERIKLIGVTGTNGKTSV
TQLIAQLSDSLGRSSAVMGTLGNGLWGHLVDSGNTTADAITVMRQLQDFDRQGAAVCAME
VSSHGLVQGRVDAVPFDVAVFTNLSRDHLDYHGTMDAYGAAKQRLFRFSSLSHGLINLDD
PIGRQWMQDKRCKGLVGFSIQGQEGASIYTKEVKQHGQGVSATLVWPEGQAKIDSPLLGI
FNLSNLVAALGALYLSGYSMSQLLTKVGHLQPVAGRMERFTTQDGVTLVVDYAHTPDAIE
QALRALRGHCRGKLWCVFGCGGDRDKGKRPLMARAAEANADCVMVTSDNARSEDPKAIID
DVLAGLEKPKVALTQVDRQQAIREVVTLASSGDLILLAGKGHETYQEIAGTRLDYDERAL
AASIAKEGL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ataatgctgttaagcgatctcctcgccccctggtttcattatgctggcggtgagtcactg
actcacttgacgctcgatagccgagagattggtcaaggcagcgtatttgtggcgttgccg
ggtcacagagtcgacgggcgtgagtttgtcgataaggccctgtcccaaggcgctgtcgcc
gcgctgatccataccgatgaccctgagcaacatggccaggtgtcgcaaggcaacggcctg
cgtatctatttctttcagttgcagcgacagttgtcggcgctcgcctctcagctctatagc
ctagggcgggagcggatcaagcttattggcgtgacaggcaccaacggtaagacctccgtg
actcagctgattgctcagctcagcgacagcctagggcggtcaagcgccgtgatgggcact
ctaggtaacggcctttggggccatctggtcgatagtggtaacactacggccgatgcgatt
accgtgatgcgtcagctacaagattttgaccgtcagggcgccgctgtgtgcgccatggaa
gtttccagtcatggtttagttcaggggcgtgtcgatgccgtgccattcgatgtggcggtc
tttactaatctcagtcgtgatcacctcgattatcacggcaccatggatgcttacggcgcg
gccaagcaacgtctgttcaggttcagttcgttaagtcatggtctgattaacttagacgat
ccaataggccgccagtggatgcaggataaacgctgcaaggggctggtgggctttagcatt
caagggcaggaaggcgcctccatctataccaaagaggtgaagcagcatggccaaggggtc
agcgccaccttagtctggcccgaaggccaagccaagatcgactcgcccttattgggcatt
tttaacctgtctaacctggttgcggcattaggcgccctgtatctgagtggatattccatg
tctcagctgctgaccaaggtgggtcacttacagcctgtggcgggacgtatggagcgtttt
accactcaagatggcgttaccttagttgtcgattatgcccatacacccgatgccatagaa
caggcgctacgggcgctgcgtggtcattgccgtggcaagttatggtgcgtctttggctgt
ggtggggatcgtgataagggcaagcgtcctttgatggcacgtgccgccgaggccaatgcc
gattgcgtcatggtcaccagtgataatgcccgcagtgaagatcctaaggccattattgac
gatgtgctcgccggacttgagaagccaaaggtggcactgactcaggtggatagacaacag
gcgatccgcgaagtcgtgacgctagcttcgtcaggcgatctgattttgctggcaggaaaa
ggccatgaaacctatcaggagatcgccggtactcgtctcgactatgatgagcgtgctctg
gcagcatcgattgcaaaggagggcctatga
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