Shewanella mangrovisoli: K0H60_10960
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Entry
K0H60_10960 CDS
T09316
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
smay
Shewanella mangrovisoli
Pathway
smay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K0H60_10960 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smay03400
]
K0H60_10960 (nth)
Enzymes [BR:
smay01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K0H60_10960 (nth)
DNA repair and recombination proteins [BR:
smay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K0H60_10960 (nth)
Prokaryotic type
K0H60_10960 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Aldose_epim
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QYK07368
LinkDB
All DBs
Position
2498300..2498941
Genome browser
AA seq
213 aa
AA seq
DB search
MNQEKRIQILTRLRENNPKPETELNFSSPFELLVAVTLSAQATDVSVNKATDKLFPVANT
AHSIYALGVDGLKEYIKTIGLYNNKAINVIKACEILIEKYNGEVPEDREALESLPGVGRK
TANVVLNTAFGWPTIAVDTHIFRMANRTKFAPGKNVVEVEERMLKVVPAEFKVDVHHWFI
LHGRYTCLARKPRCGSCIIEDLCEFKEKVYPEE
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaaaaacgcatccaaatcctcacccgccttcgcgaaaacaatcccaaaccc
gaaaccgagctgaatttctctagtccctttgaattgttggtggcggtgactttatcggcg
caggcgaccgatgtgagcgtgaataaggcaaccgataaactatttccagtcgccaatacc
gcccacagtatttatgccttaggcgtggatggattaaaggaatatatcaagacgattggc
ctgtataacaacaaggccatcaatgtgattaaagcttgtgagatcttgattgaaaaatac
aatggcgaagttccagaggacagagaagcgctagaatcgcttcctggcgtaggccgtaaa
accgctaacgtggtgctcaataccgcctttggctggccgaccatcgccgtcgacacccat
atctttcgcatggcaaaccgcactaaatttgcccccggtaaaaatgtggtcgaagtcgag
gaacgcatgttaaaggttgttcccgccgaatttaaggtcgatgtgcatcactggtttatt
ctgcatggccgctatacctgtctggcccgcaaaccccgctgcggtagctgcattattgaa
gatttgtgtgagtttaaagaaaaggtctatcccgaagagtaa
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