Shewanella mangrovisoli: K0H60_16585
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Entry
K0H60_16585 CDS
T09316
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
smay
Shewanella mangrovisoli
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smay03009
]
K0H60_16585 (rlmC)
Enzymes [BR:
smay01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
K0H60_16585 (rlmC)
Ribosome biogenesis [BR:
smay03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K0H60_16585 (rlmC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_15
Cons_hypoth95
UPF0020
Motif
Other DBs
NCBI-ProteinID:
QYK08410
LinkDB
All DBs
Position
complement(3797245..3798399)
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AA seq
384 aa
AA seq
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MSTLVQCGYFERGQCQSCRHIKLPMAQQLAAKTQELQQLLAPFVDKTEPQFLPPVVGDSS
GFRNKAKMVALGAAHTPVLGIVSPSGEAVSLCDCLLYPTDMQALLHRLERFVQQAGIPPY
RVDKAKGELKFILLTRSQVRGEYMLRFVLRSRDAIARIERELPTLMAEYPQIKVISVNLQ
PIHMAILEGEEEIFLTENTRLEERFNDVPLFIRPKSFFQTNPQVAAKLYQTAREWVADFA
PASLWDLFCGVGGFGLHCASKEIPLTGIEIEAEAIACAKMSAQLMGLDKVEFMALDSTDF
AKGEAAQTKPELIIVNPPRRGIGESLCDSLSEFAPKAILYSSCNPKTLAKDLGHIRGYRL
TKVQLFDLFPHSDHFEVLALLVKD
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacattagtacaatgtgggtattttgaacgaggccaatgccaatcctgtcgccat
attaagctccctatggcgcagcaactggcggccaaaacccaagaattgcagcaattgtta
gcgccttttgtcgataagaccgaaccgcaatttttaccaccggttgtgggtgacagcagc
ggttttcgtaacaaggcgaaaatggtcgccttgggcgcagcccatacgcctgtgttgggg
attgttagtcccagcggcgaagcggtgagcctgtgtgactgcctgttgtatcctactgat
atgcaagctttactccatcgtttagagcgctttgtgcagcaggcgggcattccgccttac
cgtgtcgataaggccaagggcgagcttaaatttatcctactgacgcgcagccaagtgcgc
ggcgagtatatgttgcggtttgtgctgcgctcgcgggatgccatcgcccgtatcgagcga
gaattgcctacgctgatggcggaatatccgcagatcaaagtcatctcagtcaatttgcaa
cctattcatatggctatcttggaaggtgaagaggagattttcctcaccgaaaacactcgc
ctcgaagagcgctttaacgatgtgcctttgtttattcgtcccaagagcttttttcaaacc
aatccgcaggtggcggcaaagctgtatcaaaccgcccgtgagtgggtggccgacttcgcg
ccagcttccctttgggacttattctgtggggtaggtggctttggtttgcattgtgctagc
aaggaaatcccactgacagggattgaaattgaagccgaagctattgcctgtgctaaaatg
tcggcgcagttgatgggattggataaagtagagtttatggcgctcgattccaccgacttt
gccaagggcgaggcggcgcaaacgaagcctgagctgattattgtcaatccaccgcgccgc
gggattggtgagtccctgtgcgattccttaagtgagtttgcgcctaaggcgattttgtat
tccagctgcaatcctaaaaccttagccaaagatctcggccatatccgtggctatcggtta
actaaggtgcagttattcgatctttttcctcactctgatcatttcgaagtgttagcctta
ttagtcaaagactaa
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