Shewanella mangrovisoli: K0H60_20195
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Entry
K0H60_20195 CDS
T09316
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
smay
Shewanella mangrovisoli
Pathway
smay01501
beta-Lactam resistance
smay01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0H60_20195
01503 Cationic antimicrobial peptide (CAMP) resistance
K0H60_20195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smay02000
]
K0H60_20195
01504 Antimicrobial resistance genes [BR:
smay01504
]
K0H60_20195
Transporters [BR:
smay02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0H60_20195
Antimicrobial resistance genes [BR:
smay01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0H60_20195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QYK09083
LinkDB
All DBs
Position
complement(4645382..4648516)
Genome browser
AA seq
1044 aa
AA seq
DB search
MARFFIDRPIFAWVIALIIMLAGVLSIRSLPVSQYPSIAPPTVVISANYPGASAKIVEDS
VTQVIEQRMKGIDHLRYIASTSDSFGNASITLTFNAEADPDIAQVQVQNKLQGAMTLLPQ
EVQSQGVNVNKSSSGFLMVLGFVSTDGSLDKGDIADYVGANIQDPMSRVPGVGEIQIFGA
QYAMRIWLDPLKLTQYNLTSLDVVSAIRAQNAQVSAGQLGGTPSLPGQELNATVSAQSRL
QTPEQFRKIIIKSDTSGANVFLGDVARVELGSESYAVESLYNGKPASGIAIKLATGANAL
DTAEAVRAKVEELRPFFPAGLDVVYPYDTTPFVEKSIEGVVHTLLEAIVLVFVIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSATGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLSPLEATRKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSITIVSAMAL
SVLVALILTPALCATMLKPLKKGHGHIETGFFGWFNRGFDRLTNRYESSVAGIIKRSFRV
MMIYAALVVAVGWIFMRMPTAFLPDEDQGILFTQAILPTNSTQESTLKVLEKVSDHYLAE
EGVRSVFSVAGFSFAGQGQNMGIAFVGLKDWSEREAPGMDVQSIAGRAMGVFSQMKEAFV
FAFVPPAVIELGTANGFDMYLQDKNGQGHDKLVAARNQLLGMAAQNPNLVGVRPNGQEDA
PIYQLHIDHAKLSALGIEIANVNSVLATAWGGSYVNDFIDRGRVKKVYVQGDAQYRMQPE
DLDTWYVRNSKGDMVPFSAFATGAWEYGSPRLERFNGLPAMNIQGATAPGFSTGAAMNIM
EDMVKQLPPGFGIEWNGLSYEERLSGNQAPALYALSILVVFLVLAALYESWSVPFAVILV
VPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEFYEKGAGLIEATL
HAVRVRLRPILMTSLAFGLGVVPLAISTGVGSGSQNAIGTGVLGGMMSSTFLGIFFVPLF
FVIVERIFSKREKKGKEEKPTSAE
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttttttattgatcgccccatctttgcgtgggtgatcgccttaattattatg
ttggcgggggttctgtcgatccgatccctgccagtctcgcagtaccccagtattgcgcca
ccgacagtggtgatcagtgcgaactacccaggtgcatcggccaaaatcgttgaagactca
gtgactcaggtgattgagcaacgtatgaaaggtatcgaccacctacgttatatcgcatcg
accagtgatagctttggtaacgcgtctattactttgacctttaacgcggaagccgatccg
gatatcgcgcaggttcaggtacagaacaagttacagggcgcaatgactttgttaccacaa
gaggtgcaatctcaaggggttaacgttaacaagtcaagctcgggcttcctaatggtactg
ggcttcgtctcgactgacggttctttagataagggtgacatcgccgactatgtgggcgct
aacatccaagatcctatgagccgtgtacctggcgtgggcgaaattcagattttcggtgcc
caatatgcgatgcgtatatggttagatccactgaagctgacccaatacaatctcaccagc
ttagatgtggtgagcgctatccgtgcgcaaaacgcgcaggtatcagcgggtcaactcggt
ggtacaccatcactgcctggacaagagttaaacgcgactgtatcggcacagagccgtctg
caaacgccagaacaattccgcaagatcatcatcaaatccgatacatcgggtgcgaacgtg
ttcttgggtgatgtggcgcgtgttgagctaggttctgaaagctatgcggtagagtcgctg
tataacggcaaacccgcttctggtattgcgattaagttggctactggtgctaacgcctta
gacacggcagaagccgttcgcgctaaagttgaagagttacgtcccttcttccctgctggg
ctagatgtggtttacccctacgatacaacgccattcgttgagaaatcgattgaaggcgtg
gtacacactctgctcgaagctatcgtactggtgttcgtcatcatgtacctcttcctgcaa
aacttccgtgcgacgctcattccaaccatcgcagtacctgtcgtattgctgggtaccttt
gcgattctgtcggcaacgggcttctccatcaacaccctcaccatgttcgctatggtgctg
gcaattggtctgctcgtggacgacgcgattgtggtggtggaaaacgttgagcgggtaatg
gctgaagagggtttaagcccactcgaggcgacccgtaagtcgatggatcaaattactggc
gcgttagtcggtatcggtctgaccttgtcagcggtattcgtacctatggcgtttatgtcg
ggttcaaccggggtaatttaccgtcagttctcgatcactatcgtttctgcgatggcgctg
tctgtgctggtggccttgattttaacgcctgcactctgtgcgaccatgttaaaacctttg
aagaagggccatggccatatcgaaaccggtttcttcggctggtttaaccgtggcttcgat
cgcttaacgaatcgttacgaatcgagtgtggctggcattataaaacgtagcttcagagtc
atgatgatttacgctgcattagttgtggctgtgggctggatcttcatgcgcatgccaacg
gcattcttacccgacgaagaccaaggtatcttgttcacgcaggcgattttgccaactaac
tcaacccaagaaagtacgcttaaagtgttggagaaggtctctgatcactatctggctgaa
gagggcgtgagatcggtattcagcgtggcgggcttcagtttcgcgggtcaaggccagaac
atgggtattgccttcgttggtttgaaggattggtcagagcgtgaagcgccaggtatggat
gtgcaatccattgcgggccgcgcgatgggcgtattcagccaaatgaaagaagcctttgta
ttcgccttcgtaccgcctgcggtaatcgagctgggtacggctaacggtttcgacatgtac
ctgcaagataagaatggccaagggcacgacaagttagtcgctgcgcgtaaccaattgttg
ggcatggcggcacagaatccaaacctcgtgggcgttcgtccaaacggtcaggaagatgcg
ccaatctatcagttgcatatcgaccatgccaaactgagtgccttaggcattgagattgcg
aacgtgaacagtgtactcgcaaccgcatggggtggctcttatgtaaacgactttatcgac
cgtggtcgtgtgaagaaggtttacgtacagggtgatgcgcaataccgtatgcaaccagaa
gacttagacacttggtacgtgcgtaacagcaagggtgacatggtgccattctcggccttc
gcaacgggcgcatgggaatatggttcacctcgtctagaacgcttcaacggtttacctgcc
atgaacattcaaggcgcaacggctcctggtttcagtaccggtgcggcgatgaatatcatg
gaagacatggtgaagcagttacctccaggctttggtatcgagtggaacggcttatcctat
gaggaacgtttatccggtaaccaagcgccagcgctgtatgctctgtcgattctggtggta
ttcctcgtactggcagcactttatgagagctggtctgtaccgttcgcagtaatcctagtg
gttccgctcggtattatcggtgccctgctggcgatgaatggtcgtggcttgccaaacgac
gtgttcttccaggtgggtctgttgacgacggtcggtttggcgacgaagaacgccatcttg
attgtggaatttgccaaagagttctatgaaaaaggtgcgggtcttattgaggcgacctta
catgcggtccgcgtgcgtttgcgtccaattctgatgacgtcactcgccttcggtctgggt
gttgtaccgttagcgattagtacgggtgtaggttctggtagccagaacgccatcggtact
ggggtactcggcggtatgatgagttcgaccttcctgggtatcttcttcgtgccgttgttc
tttgtgattgtggaacgtatctttagtaagcgcgagaagaaaggtaaagaagaaaagccg
acctcggcggagtaa
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