Shewanella mangrovisoli: K0H60_20200
Help
Entry
K0H60_20200 CDS
T09316
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
smay
Shewanella mangrovisoli
Pathway
smay01501
beta-Lactam resistance
smay01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smay00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0H60_20200
01503 Cationic antimicrobial peptide (CAMP) resistance
K0H60_20200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smay03036
]
K0H60_20200
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smay02000
]
K0H60_20200
01504 Antimicrobial resistance genes [BR:
smay01504
]
K0H60_20200
Chromosome and associated proteins [BR:
smay03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
K0H60_20200
Transporters [BR:
smay02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
K0H60_20200
Antimicrobial resistance genes [BR:
smay01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0H60_20200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
YknX_C
HH_EMRA
Beta-barrel_RND_2
HH_AAEA_pHBA
BSH_CusB
HH_CzcB
HH_CyaD
BSH_CzcB
HH_YBHG
GPS2_interact
DUF5801
HH_AprE
Motif
Other DBs
NCBI-ProteinID:
QYK09084
LinkDB
All DBs
Position
complement(4648526..4649674)
Genome browser
AA seq
382 aa
AA seq
DB search
MRQTIKLASVISVALWMAACSPQEDKAAQAGAGPQSMEVGVINVAAKPQVIQIELPGRSK
AFLEAEVRPQVSGIITKRSFVEGGHVKQGESLYQIDSAPYKAALVSANADLARANASLAS
AKAKAARYQQLVKTNAISKQDFDEAEAAYKEALASVTVAEAAINTAKINLEYTEVLAPIS
GRIGKSSVTAGALVTANQSQTLATIQQLDPINVDIAQSSAQLLRLKAKLQQGKLQAADNA
DVQLVLEDGTVYGHSGKLQFAEVSVDENTGSVILRAEFPNPDGLLLPGMYVRAVLNTGTD
PQAILVPQKAISRNAKGQAVAMVVNDQGVVEAKIVTTAEVIDNQWRITAGLEAGDKLIVE
GLQKIRPGAPVTPKVISETQAQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagacaattaaacttgcctcagtaatcagcgtggcgttgtggatggcagcttgt
agccctcaagaggataaggcagctcaagccggcgctgggccgcagagcatggaagttggt
gtaatcaacgtggcggctaagcctcaggttatccaaatcgaattacccggccgtagcaag
gcgttcctcgaagccgaagtacgtcctcaagtcagtggtattattaccaagcgtagcttt
gtcgaaggcggtcatgtgaagcagggcgagtccctctatcaaatcgattccgcgccttac
aaggcagcactggtgagcgctaacgccgatttagccagagcgaatgcaagtcttgcttct
gctaaggccaaagcggcccgttatcaacaactggttaagactaacgccatcagtaagcag
gatttcgatgaagccgaagcggcttacaaagaagcgctggcaagcgtgacagtcgctgaa
gcggcaatcaacaccgccaaaatcaacctcgaatacaccgaagtgttagcgccaatttct
ggccgtatcggtaaatcgagtgtgactgcgggtgcgctggtcacggcaaaccaaagccaa
acactggcgaccattcaacagctcgatcctatcaatgtggatatcgcccaatcgagtgcc
caattgctgcgcctaaaagcgaaattacagcaaggcaagttgcaagcggctgataacgct
gacgtgcagttagtgctcgaagacggcactgtttatggccacagcggtaagctgcaattt
gctgaggtgagtgtggatgaaaacacgggctcagtgatcctgcgtgctgaattccctaac
ccagatggcctcttactgcctggcatgtatgttcgcgccgtgctgaatactggtaccgat
cctcaagctatcttagtgccacaaaaagccattagccgtaacgctaaagggcaagccgtg
gccatggtggtgaacgatcaaggtgtagtggaagcaaaaattgtgaccacagctgaagtt
atcgacaatcaatggcgtattactgccggtttggaagcgggcgataagttgattgtggaa
ggattacaaaaaatccgtccaggtgcaccagtcactcccaaagttatttctgaaacccaa
gcacaatag
DBGET
integrated database retrieval system
