Sphingopyxis macrogoltabida 203: LH19_19925 Help Entry LH19_19925        CDS       T04627                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism smaz  Sphingopyxis macrogoltabida 203 Pathway smaz03030   DNA replication smaz03410   Base excision repair smaz03420   Nucleotide excision repair smaz03430   Mismatch repair Brite KEGG Orthology (KO) [BR:smaz00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     LH19_19925    03410 Base excision repair     LH19_19925    03420 Nucleotide excision repair     LH19_19925    03430 Mismatch repair     LH19_19925  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:smaz03032]     LH19_19925    03400 DNA repair and recombination proteins [BR:smaz03400]     LH19_19925 Enzymes [BR:smaz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      LH19_19925 DNA replication proteins [BR:smaz03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      LH19_19925 DNA repair and recombination proteins [BR:smaz03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      LH19_19925    NER (nucleotide excision repair)     GGR (global genome repair) factors      LH19_19925    MMR (mismatch excision repair)     DNA ligase      LH19_19925   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       LH19_19925 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB BRCT DNA_ligase_ZBD HHH_2 Nlig-Ia PTCB-BRCT Lar_restr_allev DZR_2 Motif Other DBs NCBI-ProteinID:  ALJ15147 UniProt:  A0AAC9AWR4 LinkDB All DBs Position complement(4011128..4013272) Genome browser AA seq 714 aa AA seqDB search MTEIESLTEADAANELMRLAKTIARHSKLYHAEDAPEISDADYDALVRRNNELEAAFPNL IRADSPNNQVGAAVEASPLAKVTHAQRMMSLDNAFSGADVEEFAARVRRFLNLGEGDIVA LTAEDKIDGLSCSLRYEKGLLVQAATRGDGSVGEDVTPNVRTIADIPQQLAGAVPDVFEI RGEVYMAKADFTALNARLLAEADDPEKARQFANPRNAAAGSLRQKDAGITAARPLRFLAH GWGEVSDVPETTQFAMMKQIESWGVPVSPLLRRFEAVEDVLAHYALIEAERAELPYDIDG VVYKVDRLDWQARLGFVAKAPRWAIAHKFPAERAQTTLEAIDIQVGRTGKLTPVGRLVPV TVGGVVVSNVTLHNRDEIGRLGVRPGDRVVVQRAGDVIPQVVENLTRDEDRAPYMFPDHC PVCGSEAVAEEGEVDVRCTGGLICGAQKFERLRHFVSRGALDIEGLGEKSIAEFLELGWL DKGPADIFRLRNHRADLLGREGWKEKSVDNLFAAIEAKRQPDAARLLFGLGIRHIGAVTA RDLLKGLGDIAVLPGKAAEIQAYLDANPQAEGESDGKFVARKMEAIKAILDVRADGIGPA VAEALGDFFHEPHNRALWDDLLSEVSPPPYVVETRESEVSGMTVVFTGKLETMSRDEAKA QAEALGAKAAGSVSAKTDLVVAGPGAGSKLKQASALGIRVIDEAEWAEIVAAAG NT seq 2145 nt NT seq  +upstreamnt  +downstreamnt atgaccgagattgaatcgctgaccgaagccgatgccgccaacgaactgatgcggctggcg aagaccatcgcccgtcacagcaagctttatcatgccgaggacgcgcccgaaatttcggat gccgactatgacgcgcttgtccgccgcaacaacgagctcgaagcggccttcccgaacctg atccgcgccgacagcccgaacaaccaggtcggcgccgcggtcgaggcttcgccgctggca aaagtgacgcacgcacagcggatgatgagcctcgacaatgcgttcagcggcgcggatgtc gaggagttcgcggcgcgggtgcggcgcttcctcaatctcggcgagggcgacatcgtcgcg ctgactgccgaggacaagatcgacggcctgtcctgttcgctacgctacgaaaagggcctg ctcgtgcaggccgcgacgcgtggcgacggcagcgtcggcgaggatgtgacgcccaacgtc cgcaccatcgccgacatcccgcaacagcttgccggcgcggttcccgatgtcttcgagatc cgcggcgaagtttacatggcgaaggccgatttcaccgcgctcaacgcacggctgctcgcc gaggccgacgaccccgaaaaagcgcgccagttcgccaatccgcgcaatgccgccgcgggc tcgctgcgccagaaggacgccggcatcaccgccgcgcgcccgctgcgtttcctcgcgcac ggctggggcgaggtaagcgacgttcccgagacgacgcaatttgcgatgatgaagcagatc gaaagctggggcgtgcccgtgtcgccgctgctgaggcgcttcgaggcggtcgaggatgtg ctcgcccattatgcgctgatcgaggctgagcgcgccgaactgccctatgacatcgacggc gtcgtctacaaggtcgaccggctcgactggcaggcacgcctcggcttcgtggccaaggcg ccgcgctgggccatcgcgcataaattccctgccgaacgcgcgcagacgacgctcgaagcc atcgacatccaggtcggccgcaccgggaaactgaccccggtcgggcggctcgttcccgtg accgtcggcggcgtcgtcgtgtcgaacgtcacgctccacaaccgcgacgagatcggccga ttgggggtacgccccggcgaccgcgtcgtcgtccagcgcgccggcgacgtcatcccgcag gtggtcgagaatctgacccgcgacgaggaccgcgcgccttacatgttccccgaccattgc cccgtctgcggcagcgaggcggtcgccgaagagggcgaggtcgacgtccgttgcacgggc ggcttgatctgcggcgcgcagaagttcgagcgcctgcgccatttcgtcagccgcggcgcg ctcgatattgaggggctcggcgaaaagagcatcgccgaatttctcgagcttggctggctc gacaaggggcctgcggacattttccgcctcaggaaccaccgcgccgacctgctcgggcgc gaggggtggaaggaaaagtcggtcgacaatcttttcgccgcgatcgaggcgaaacggcaa cccgacgcggcgcggctgctgttcgggctcggtatccgccatatcggtgcggtgaccgcg cgcgacctgctcaaggggctcggcgacatcgccgttcttcccggaaaagccgctgaaatt caggcctatctcgacgcaaacccgcaggccgaaggcgagtccgacggcaagttcgtcgcc cgcaagatggaggcgatcaaggcgatcctcgacgttcgcgccgacgggatcgggcccgcg gtcgccgaagcgctgggcgatttcttccacgagccgcataatcgcgccctgtgggacgat ctcctctccgaagtctcgccgccgccttatgtggtggagacgcgagaaagcgaagtttcg ggaatgacggtggtgttcaccggcaaactcgaaacgatgagccgcgacgaagcaaaggcg caggccgaggcgctgggcgccaaggccgcgggatcggtgagcgcgaagaccgacctcgtc gtcgcggggcccggcgcgggatcgaagctcaagcaggcgagcgcgctcggcatccgcgtg atcgacgaggccgaatgggcggagattgtcgcggcggctgggtaa

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