Streptococcus mitis: smi_1237
Help
Entry
smi_1237 CDS
T01173
Symbol
nth
Name
(GenBank) endonuclease III (DNA repair), DNA-(apurinic or apyrimidinic site) lyase
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
smb
Streptococcus mitis
Pathway
smb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
smi_1237 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smb03400
]
smi_1237 (nth)
Enzymes [BR:
smb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
smi_1237 (nth)
DNA repair and recombination proteins [BR:
smb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
smi_1237 (nth)
Prokaryotic type
smi_1237 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
TRAPPC9-Trs120
Motif
Other DBs
NCBI-ProteinID:
CBJ22482
UniProt:
D3H9D7
LinkDB
All DBs
Position
complement(1236281..1236910)
Genome browser
AA seq
209 aa
AA seq
DB search
MVLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFATF
PTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPRTREELESLAGVG
RKTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQ
AMIYFGRAICHPKNPECDHYPQLYDFSNL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggttttatcaaaaaaacgagcacgaaaagtgctagaagaaatcattgccctctttcca
gatgccaagcccagtcttgatttcaccaatcattttgaactcttggttgcggtcatgttg
tcagctcagacaacggatgcagcggtaaataaggccacaccgggtctctttgctaccttt
ccaacgccccaagcaatgtctgtggcaactgagagtgagattgcttcacacatttctcgc
ctgggactgtatcgaaacaaggctaaattcctaaaaaaatgtgctcaacagttactagac
gattttgatggtcaagtccctcggacacgtgaggaattagagagtttggcaggtgttggt
cgcaagacagccaatgttgtcatgagtgtgggttttgggattccagcttttgcagtagat
actcatgtggagcgtatttgcaaacaccacgatatcgtcaaaaaatcagcgacaccactt
gaggtggaaaaacgtgtcatggatatcttgccaccggagcagtggttagctgcccatcag
gcaatgatttattttggaagagccatttgtcatcctaaaaatccagagtgtgaccactac
ccacagttatatgattttagcaatttataa
DBGET
integrated database retrieval system
