Sinorhizobium medicae: Smed_2087
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Entry
Smed_2087 CDS
T00555
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00300
Lysine biosynthesis
smd00550
Peptidoglycan biosynthesis
smd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Smed_2087
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Smed_2087
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smd01011
]
Smed_2087
Enzymes [BR:
smd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Smed_2087
Peptidoglycan biosynthesis and degradation proteins [BR:
smd01011
]
Precursor biosynthesis
Amino acid ligase
Smed_2087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
YqeC
Motif
Other DBs
NCBI-ProteinID:
ABR60920
UniProt:
A6UB90
LinkDB
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Position
complement(2145344..2146804)
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AA seq
486 aa
AA seq
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MKIRDLAGSSFPELSAQLKGDAANIEIGGITADSRQVRPGDLFVAVAGAKADGSAYITDA
LSRGASAVVAGTSARAEAGINVFTISEPRRFLAKASSSFFGRQPETMVAVTGTAGKTSVA
SFTRQIWAHSGFSAAMIGTTGVVSPGRAEYGSLTTPDPVSLHKLLAELADEGVTHAAMEA
SSHGLDQQRLDGVNLAAAAFTNLGRDHMDYHPTVEHYMASKMRLFAALLPKGSPAVIFAD
DQWSADAIAAARKAGHDVRTVGRNGDFIALKRVEHFRHKQSAEVHVGDDIYEIHVPLAGD
FQVANALVAAGLAMSTGISAKAAFSALERLQGASGRLELVGQTKDGALAYVDYAHKPDAL
SNVLESLRPFTTGRVVVVFGCGGDRDKGKRPIMGEIASRLADVVIVTDDNPRSEVPEVIR
AEIMAAAKGATEIGDRAEAIRVAVGMLKTGDTLIVAGKGHEEGQTVGSVTLPFSDHAEVR
KALGGL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcagggacctggcgggatcgagtttcccggaactttcggcgcagctgaagggc
gacgccgcgaacatcgagatcggcggcattacggccgatagccggcaggtcaggcccggc
gacctcttcgtcgcggtcgccggagcgaaggcggacgggtccgcttacataacggacgcg
ctatcgcgcggggcctcggcggtcgtcgcgggaaccagcgcccgggcagaggctggcatc
aacgttttcacgatctccgaaccacgccgtttcctggcgaaggcgtcgtcgagctttttc
ggacgccagcccgagacgatggtggcggtcacaggtacggcggggaagacgtccgttgcc
tccttcacccggcagatctgggcgcattccggtttctcggcggcgatgatcggcaccacg
ggcgtcgtatcacccggccgcgccgaatacggttctctgacgacaccggatccggtgtcg
ctgcacaagctgctcgccgaactggctgatgagggcgtgacccacgccgcaatggaggcg
tcgagccacggcctggaccagcaacggctggacggcgtcaatctcgctgccgccgccttt
acgaatctcggccgcgatcacatggactaccatccgacggttgagcattacatggcctcg
aagatgcgcctctttgcggcgttgctgccgaaaggttcgccggccgtgatcttcgccgat
gaccaatggtccgccgatgcgatcgctgccgctcgcaaggcagggcacgatgtgcggacc
gttgggcgcaatggcgatttcatcgcgctgaaacgtgtcgagcatttccgccacaagcag
tcggcggaggttcatgtcggcgacgacatctacgagatacacgtgccgctcgccggtgac
ttccaggtcgccaatgcactcgttgcggcggggcttgcaatgtcaacggggatttccgcg
aaggcagctttctcggcgctggagaggctgcagggcgcctcagggcgcctcgaactcgtc
gggcagacgaaggatggcgcgctcgcctacgtggattacgcccacaagccggacgcgctc
tcaaatgtgctcgaatccctgcgtccttttaccactggccgggtcgtcgtggttttcggt
tgcggcggcgaccgggacaagggcaagcgcccgatcatgggagagatcgccagccgcctt
gccgatgtcgtcattgtcacggacgacaacccgcgctcggaagtgccggaggtgatccgc
gccgagatcatggcggcggcaaagggcgctacggagattggcgatcgcgccgaggcgatc
cgcgttgccgtcggcatgctgaagaccggcgatacgctgatcgtcgcgggcaaagggcat
gaagaggggcagacggttggttccgtgacgctgcctttctccgaccacgcggaggtccgc
aaggcactgggaggtctttga
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