Sinorhizobium medicae: Smed_3187
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Entry
Smed_3187 CDS
T00555
Name
(GenBank) NAD-glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
smd
Sinorhizobium medicae
Pathway
smd00220
Arginine biosynthesis
smd00250
Alanine, aspartate and glutamate metabolism
smd00430
Taurine and hypotaurine metabolism
smd00910
Nitrogen metabolism
smd01100
Metabolic pathways
smd01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
Smed_3187
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Smed_3187
00220 Arginine biosynthesis
Smed_3187
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
Smed_3187
Enzymes [BR:
smd01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
Smed_3187
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_HM3
GDH_ACT2
GDH_ACT3
GDH_HM1
GDH_ACT1
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
ABR62011
UniProt:
A6UED1
LinkDB
All DBs
Position
3352309..3357096
Genome browser
AA seq
1595 aa
AA seq
DB search
MGVKYNPKRDRHIDAARAAGSRFGAETLAPEILFGGASNDDLDQYTPEMLALTAAHARSE
LARWDGGKPRVSVETVPGIAPGGTEASIIAITERNMPFLYDSVMGEVTSTHRDIHLAIHP
ILVMEAGQAVKLFDPDEGSRPEHRVSHIQIHLSKLTPLEERSLSKRISDVLEQVHQAVHD
WPAMTALLDQAMRELEDYNASRKKSDRDEALAFLRWLRDSNFTFLGMREYTYSGKGGEAT
VERGKGRGLGILSNPDVRVLRQGKDAVLTTPEILAFLEGPDFLIVTKANVKSVVHRRAHM
DYIGVKRFDASGNVIGELRIVGLFTSTAYTRQASEIPLLRHKIEKIIDHFGYDPQSHSGK
TLANTLESYPRDDLFQIDIGLLAAFCEQINELGDRPRVRVLPRIDHFDRFVSVIVFVPRE
QYDSDVREKLGEYLKTVYDGRVSAYYPAFPEGGLARVHFIIGRSGGKTPRVPQAKLEEAV
RAIVTRWIDRFNLLARKEGTEISVGEAYQAAFTPAEAYADLADISACRADDPIRISFYHR
HQERPDTLELKIFHADTPVSLSRRVPLLENLGFRVISEQTYDIGVRTHGDEPREVVLHDM
ELIHRDGHTLNLAKMGPNLEEAFLAAWDGATEDDNFNRLVMLAGLTAREVTVLRAYARYL
RQAGITYSQGYIADTLNKYPTIAADIFRLFSTRMDPTTEVKTRTKKCNALLAGIEEALSA
VPSLDEDRILRRYVNAVQSTLRTNYFQKDADGRPRAVLAFKLDPKQLDGLPEPRPFREIF
VYGTEVEGVHLRFGKVARGGLRWSDRAQDYRTEVLGLVKAQQVKNAVIVPVGAKGGFYPK
QLPAGGSRDEIFKAGTEAYKTYIRTLLSVTDNIVGQEVVPPADTLRLDGDDPYFVVAADK
GTATFSDTANALAQEADFWLDDAFASGGSAGYDHKKMGITARGAWEAVKRHFREMDVDIQ
TTPFTVAGVGDMSGDVFGNGMLLSEKIRLIAAFDHRDIFIDPNPDIDLSFAERKRIFALP
RSSWQDYDRKALSPGAMIISRSEKLVTLTPEAMAAIGIDKPKATPFEIMSTILKSPVDLL
WFGGIGTYVRGSGETDAEVGDRANDAIRITAEEVRARVIGEGANLGVTQKGRIGFSLNGG
RCNSDAIDNSAGVNSSDVEVNIKIALASAMRDGRLTRPKRNTLLASMTDEVGHLVLRNNY
QQSLAISLTEMQGLANRTPLARLMARLGADGHLNRKVETLPTDQAMSERYQAGRPLTRPE
IGVLLSYAKLVLFDELTISDLPDDPYFTATLERYFPAKMRKTYAGDIHGHRLRREIIATV
LVNETINRGGPAFASTLTDATGFLSADVVKAAVLALDGFDLPRIYAEIDALDNRIGGMIQ
NRLYQEVGRIFALVAARVLRTRASEGSVAEAVARLRDGLQKLRGTMRAAISREGAEEARQ
KAAGFIENGVPAKLAEEIAELSLMTLVPEIMQIAIVTGEPLNRTAQAYFTVTESLRVNRL
LAAADRVPATEQFEAMALSRAVGDIGTARRDITIAALVEYKGERNPVLAWQDRDRQRVAS
VGDQLRLLTEKGETTLAKVTVAAGVLSDLARGWTK
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgaagtataatccgaagcgggatcggcacatcgatgcggcccgggcggcagga
tccagatttggggccgagaccctggcacctgaaatcctcttcggcggcgcgagcaacgac
gatctggaccagtacacgcccgaaatgctggcactcaccgcggcccatgcacgcagcgag
ctcgcccgctgggacggcggcaagccgcgggtgtcggtggagacggtacccggcattgcc
cctggcggcaccgaggcctcgatcatcgcgatcaccgagcgcaacatgcccttcctttac
gactcggtgatgggagaagtgacgagcacacaccgcgacatccatctggcgatccacccg
atcctggtgatggaagccggccaggcggtgaagctgtttgatcccgacgaggggagtaga
cccgagcaccgcgtcagccacatccagatccatttgagcaagctgactccgctcgaggag
cgatcgctcagcaagcggatttcggacgtcttggagcaggtccaccaggcggtgcacgat
tggccggcgatgaccgctctgctcgaccaggcaatgcgggagctggaggattacaacgcg
tcccgcaagaagagcgaccgcgacgaggcactggctttccttcgctggctaagggacagc
aactttaccttcctcggcatgcgggaatatacctattccggcaagggcggagaggcgacg
gtcgaacgcggcaagggcaggggcctcggcatcctgtccaatccggacgtgcgggtcctc
cgccagggcaaggacgcggtgctgacgacgccggagatcctcgcttttctcgagggtccc
gacttcctgatcgtcaccaaggccaatgtgaagtcggtcgtgcaccgccgtgctcacatg
gattacattggcgtcaaacgcttcgacgcttccggtaacgtcatcggagagttgcgtatc
gtcggactgttcacctcgacggcttacacccggcaggcatcggaaattccgctgctcaga
cacaagatcgaaaagatcatcgatcacttcggctacgatccgcagagccactccggcaag
acgctcgcgaatacgctggagtcctatccacgcgacgatctcttccagatcgacatcggc
ctgcttgccgccttctgcgaacagatcaacgagctcggcgatcggccgcgggtgcgggtg
ctgccgcgcatagatcatttcgaccgcttcgtttccgtcatcgtcttcgtgccgcgcgaa
caatatgactccgatgtccgggagaagctcggcgaatatctgaaaactgtctatgacggc
cgcgtctcggcctattaccccgctttccccgaaggcgggcttgcgcgagtacacttcatc
atcggccgctcgggcggcaagacgccacgggttccgcaggcgaagctcgaagaggcggtc
cgcgccatcgtcacccgctggatcgatcggttcaacctgctcgcgcgcaaggaaggaacg
gaaatttccgtcggggaggcctaccaggcagccttcacacccgcagaagcctatgccgat
ctcgcagacatctcggcctgccgggccgacgacccgatccgcatctccttctaccatcgg
caccaggagaggcccgacacgctggaactgaagatcttccatgccgacacgcccgtttcg
ctgtcgcgccgtgtgccgcttctcgaaaatctcggctttcgcgtgatcagcgagcagacc
tacgacatcggcgtgcgcactcatggggacgagccccgcgaggtcgtgctccacgacatg
gaactgatccaccgcgacgggcacacactcaacctcgccaagatgggtccgaacctggag
gaggccttcctcgctgcctgggacggcgcgacggaggacgacaatttcaaccggctggtc
atgctggctgggctaaccgcccgcgaggtgacggtgctgcgtgcctatgcccgttatctg
cgccaggcaggcatcacctattcccagggttatatcgccgataccctcaacaaatatccg
acgatcgccgccgacatcttccggctcttctccacccgtatggatccgacgacggaggtg
aagacgcgcactaagaaatgcaacgccttgctggcggggatcgaggaggcactgtcagcc
gtgcccagcctcgatgaggacaggattctgcgccgatacgtcaacgcggtccagtcgacg
ctgcggacgaattacttccagaaggacgcggacggccggccgcgcgcggttctcgccttc
aagctcgacccgaaacagctcgacggcctgccggagccgcggcctttccgcgaaatcttc
gtctatggcaccgaagtggaaggtgtccatctgcgcttcggcaaggtggcgcgcggcggc
cttcgctggtcggaccgggcacaggattaccgcaccgaagtgctcggtctggtcaaggcg
cagcaggtgaagaacgccgttatcgtgccggtcggggccaagggcggcttctatcccaag
cagctgcctgccggcggcagccgcgacgagatcttcaaagcgggaaccgaggcgtacaag
acctacatccgcacgcttctctcggtcaccgataatattgtcggccaggaggttgtgcct
cccgcggatacgctgcggctcgacggcgacgacccctatttcgtcgtcgcggccgacaag
gggacagcgaccttctcggacacggcgaatgcgctcgcccaggaagcggacttctggctg
gacgacgccttcgcgtccggcggttccgcaggctatgaccacaagaaaatggggatcacc
gcccgcggggcatgggaagccgtcaagcggcacttccgcgaaatggatgtcgacatccag
accacgcctttcacagtcgccggcgtcggcgacatgtcgggcgacgtcttcggcaacggc
atgctgctgtcggaaaagatccgcctcatcgccgccttcgatcaccgtgacatcttcatt
gacccgaatccggatatcgatctctcctttgccgaacgcaagcgcattttcgcgctgccg
cgctccagctggcaggattatgaccggaaggcgctctcgcccggcgccatgatcatttca
cgttcggagaagctggtgacgctcaccccggaagcgatggcggcgatcgggatcgacaag
ccgaaggcgacgccgttcgagatcatgagcaccattctgaaaagcccggtcgacctcctc
tggttcggcggcatcggcacctatgtccgcggcagcggcgagacggatgcggaggtcggc
gaccgcgcaaacgatgcgatccgcatcaccgcggaggaggtgcgggcccgggtgatcggc
gagggggccaatctcggggtcacgcagaaaggccgtatcggcttttccctcaatggcggg
cgctgcaactccgacgccatcgacaattcggccggcgtcaattcctccgacgtcgaggtc
aacatcaagatcgcgctcgcctctgccatgcgcgacggacgcctgacccggccgaagcgc
aacacgcttctggcgtcgatgacggacgaagtcggacatctggtgctacgcaacaactac
cagcagtcgcttgcgatttcgctcaccgaaatgcaggggctcgccaaccgcacgccgctc
gcgcggctgatggcgcggctcggggccgacggccacctcaaccgcaaggtggagacgctt
ccgaccgatcaggcaatgagcgagcgctatcaggcgggccggccgctcacacgcccggag
atcggcgtgctgctctcctatgcgaaactggtcctgttcgacgaactgaccatcagcgat
cttccggacgatccctatttcacggcgacgctggagcgctacttcccggcaaagatgcgc
aagacctatgccggcgacattcacgggcaccggctgcgccgcgagatcatcgccactgtg
ctcgtcaacgaaacgataaaccgcggcgggcccgctttcgcctcgacgctgacggacgcc
accggcttcctttccgccgacgtcgtcaaggccgcggtgctggcactggacggtttcgat
ctgccgcgcatctatgccgagattgacgcgctcgacaaccggatcggcggcatgatccag
aacaggctctatcaggaggtgggacgcatctttgcccttgtcgcagcgagggtgctgcgc
acccgggcctccgagggctccgttgcggaagcggttgcgcggctgcgcgacggcctgcag
aagctgcgcggcaccatgcgggcggcaatctcccgggagggggccgaggaagcgcgtcag
aaggccgcgggcttcattgaaaacggcgtgccggcaaagctcgccgaggaaatcgcggag
ctctcgctgatgaccctcgttccggagatcatgcagatcgccatagtgaccggcgagccg
ctgaaccgcaccgcccaggcctatttcaccgtcaccgagagcctgagggtcaaccgcctg
cttgcggccgccgaccgggtgcctgccaccgagcagttcgaggcaatggccttgtcacgg
gccgtcggcgatatcggcaccgcgcgccgcgacatcacaatcgccgcgctcgtcgagtac
aagggcgaacggaatccggtcctcgcctggcaggaccgcgaccggcagcgtgtggcgagc
gtcggcgaccagctgaggctcctgaccgaaaagggtgaaacgacgctcgccaaggtgaca
gtcgcagccggcgtcctcagcgaccttgcacgcggctggacgaaatga
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