Sinorhizobium medicae: Smed_3398
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Entry
Smed_3398 CDS
T00555
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
smd
Sinorhizobium medicae
Pathway
smd01501
beta-Lactam resistance
smd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Smed_3398
01503 Cationic antimicrobial peptide (CAMP) resistance
Smed_3398
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_3398
01504 Antimicrobial resistance genes [BR:
smd01504
]
Smed_3398
Transporters [BR:
smd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Smed_3398
Antimicrobial resistance genes [BR:
smd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Smed_3398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
ABR62219
UniProt:
A6UEY9
LinkDB
All DBs
Position
complement(3603392..3606538)
Genome browser
AA seq
1048 aa
AA seq
DB search
MPSFFIDRPIFAWVVAIFIMIAGIIAIPLLPVSQYPDVAPPQISINTNYPGASSQDTYQS
VTRLIEDELNGVEGLLYFESSTSASGSVSIDATFQPGTDPSQASVDIQNRVQRVEPRLPD
PVRQQGVQVDEAGAGFLLIISLTSTDGSMDAIGLGDYLSRNVLSEIQRVPGVGRAQLFAT
ERSMRVWLDPDKMLGLNLTAADVTAAIQAQNAQIASGSIGAQPNPITQQVTAPVVIKGQL
SSPEEFGAIVLRANADGSAVRLRDVARLEIGGESYTFSTRLNGSPSAAIAVQLSPSGNAM
STSAAIKTRMDELAAFFPQGLEYSIPYDTSPFVAVSIEKVLHTLVEAVGLVFLVMFLFLQ
NVRYTLIPTIVVPVALLGTCAVMLAMGFSINVLTMFGMVLAIGILVDDAIIVVENVERIM
SEEGLTPKDATRKAMKQITGAVIGITLVLASVFIPMAFFPGAVGVIYRQFSLTMVVSILF
SALLALSLTPALCASFLKQVPKGHHHAKRGFFGWFNRGFDRTSHGYTRFVGSVIRRTGRF
MIIYLILLAAMAWAFIRLPSSFLPDEDQGFVIVMMQLPSEATANRTTEVIEQTEKIFGQE
PAVDTIVAINGFSFFGSGQNAGLAFVTLKDWSERDADNAAQSIAGRATMAMSQIKDAISF
ALSPPAIQGLGTTGGFSFRLQDRAGLGEAALAEARDQLLGLASQSKILTGVRFEGMPDAA
QVSVDIDREKANTFGVTFADINSTISTNLGSSYVNDFPNAGRMQRVTVQADETKRMQPAD
LLNLNVRNSNGGMVPLSAFANVEWVKAPTQTVGYNGYPAVRISGEAAPGYSSGDAIAEME
RLVAQLPAGFGYEWTGQSLQEIQSGTQAPLLIALSCLLVFLCLAALYESWSIPVSVIMVV
PLGVIGAVLAVTMRDMPNDVYFKVGLIAIIGLSAKNAILIIEFAKELRDQGKSLIDATLE
AAHLRFRPILMTSLAFTLGVLPLAIATGASSGSQRAIGTGVMGGMISATVLAIFFVPVFF
VFVMKIFERGRAAPEPAKQASETVSPAE
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcccagttttttcatagacaggcctatctttgcctgggtggtggcgatcttcatcatg
atcgccggcatcatcgcgatcccgctattgccggtgtcgcagtatccggatgtcgcgccc
ccgcagatatcgatcaacacgaactatcccggcgcctcgtcgcaggacacctatcagagc
gtgacccgtctgatcgaggacgagctgaacggcgtcgaggggctgctttacttcgagtct
tcgaccagtgcctccggctcggtctcgatcgacgccaccttccagcccggcaccgatccg
agccaggcttcggtggacatccagaaccgggtgcagcgcgtcgagccgcgcctgcctgac
cccgtcaggcagcaaggcgtacaggtggacgaggccggcgccggcttcctgctgatcatc
tcgctgacttcgaccgacggctcgatggacgccatcgggcttggcgattacctcagccgc
aatgtgctcagcgagatccagcgcgtgcccggcgtcggacgcgcccagctctttgcgacc
gagcgctcgatgcgcgtctggctcgatcccgacaagatgctcggcctcaatctgaccgcg
gctgacgtcaccgcggcgatccaggctcagaacgcccagatcgcctccggctcgatcggc
gcccagccgaatccgatcacgcagcaagtcaccgcaccggtcgtcatcaagggccagctt
tcgagccccgaggaattcggtgcgatcgtactccgggcgaatgccgacggctccgccgtg
cggctgcgcgacgttgcgcgtctcgagatcggcggcgaaagctacaccttctcgacccgc
ctcaacggcagcccctcggcggccatcgccgtgcagctctcgccgagcggcaatgcgatg
tcgacctcggcggcgatcaagacacgcatggacgagctcgcggcgtttttcccccaaggg
ctcgaatactcgatcccctatgacacctcgcccttcgtcgcggtgtcgattgagaaggtg
ctgcacacccttgtcgaggccgtcggcctcgtattcctggtgatgttcctcttcctgcag
aacgtccgctatacgctcatccccaccatcgtggtgccggtcgccctgctcggcacctgc
gcggtcatgctggcgatgggcttctccatcaacgtgctcacgatgttcggcatggtgctg
gcgatcggtatcctcgtcgacgatgcgatcatcgtggtcgagaacgtcgaacgcatcatg
tcggaggaagggctgacgccgaaggatgcaacccggaaggcgatgaagcagatcaccgga
gcggtgatcggcatcacgctggttctggcttcggtgttcattccgatggccttcttcccc
ggcgccgtgggcgtgatctatcgccagttcagcctgacgatggtcgtctcgatcctgttt
tcggcgctcctcgcattgtcgctgacaccggcactctgcgcgagcttcctcaagcaggta
ccgaaggggcaccatcatgccaagcgcggcttcttcggttggttcaaccgcggtttcgac
cggacgtcgcacggctacacgcgtttcgtcggaagcgtcatcaggcgcacgggccgcttc
atgatcatctatctgatcctgcttgcagcaatggcctgggcatttatccggctgccctcg
tccttcctgccggacgaggaccagggctttgtcatcgtcatgatgcaattgccgtcggaa
gcgacggcaaaccgcaccacggaggtgatcgagcagaccgagaagatcttcggccaggaa
ccggcggtcgacacgatcgtggcgatcaacggtttctccttcttcggcagcgggcagaat
gcgggtcttgcattcgtgacgctgaaggactggagcgaacgcgacgccgacaatgcagcg
cagtcgatcgccggccgcgcgacgatggccatgagccagatcaaggatgcgatcagcttc
gcgctgtcgcctccggcgatccagggcctcggaacgacaggcgggttttccttccgcctt
caggaccgtgcgggtctcggcgaagcggcgctggcagaagcgcgcgaccagcttctcggc
ctcgcctcccagagcaagatcctgaccggcgtccgtttcgagggcatgcccgatgcggcg
caggtcagcgtcgatatcgaccgcgagaaggccaataccttcggcgtgacctttgccgat
atcaactcgaccatctcgaccaatctcggctcgtcctacgtcaacgacttcccgaatgcc
ggccgcatgcaacgcgtgacggtgcaggcggacgaaacgaagcgcatgcagccggcggac
ctcctgaacctgaacgtccgcaattccaacggcggcatggttccgctctcggccttcgcg
aatgtggaatgggtcaaggcgccgacgcagacggtcggctacaacggctatccggcagtg
cgcatcagcggcgaggccgctccgggctattcctccggcgatgccattgccgagatggag
cgtctggtagcccagcttccggctggtttcggctatgaatggacggggcagtcgctacag
gaaatccagtcggggacgcaggcgccgctccttatcgcgctctcctgcctgctcgtcttc
ctgtgcctggccgcgctctatgagagctggtccattccagtctcggtcatcatggtcgtg
ccgctcggcgtcatcggcgccgtgctcgccgtgacgatgcgcgacatgccgaacgacgtc
tacttcaaggtcggcctgatcgcgatcatcgggctttcggcgaagaacgcgatcctgatc
atcgaattcgccaaggaactccgcgaccagggtaaatcgcttatcgatgcgacactggaa
gctgcacatctgcgcttccggccgatcctgatgacctcgctcgccttcaccctcggcgtt
ctgccgctggcgatcgcgacaggcgcaagttccggcagccagcgcgccattggcaccggc
gtcatgggcggcatgatctcggcgacggtactggcgatattcttcgtccccgtcttcttc
gtgttcgtcatgaagatcttcgaacgcggaagagcggcgcccgagccggccaagcaggca
tccgaaaccgtcagccccgccgagtga
DBGET
integrated database retrieval system
