Sinorhizobium medicae: Smed_6178
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Entry
Smed_6178 CDS
T00555
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
smd
Sinorhizobium medicae
Pathway
smd01501
beta-Lactam resistance
smd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Smed_6178
01503 Cationic antimicrobial peptide (CAMP) resistance
Smed_6178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smd03036
]
Smed_6178
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smd02000
]
Smed_6178
01504 Antimicrobial resistance genes [BR:
smd01504
]
Smed_6178
Chromosome and associated proteins [BR:
smd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Smed_6178
Transporters [BR:
smd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Smed_6178
Antimicrobial resistance genes [BR:
smd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Smed_6178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
ABR64796
UniProt:
A6UMB6
LinkDB
All DBs
Position
pSMED02:1098734..1099837
Genome browser
AA seq
367 aa
AA seq
DB search
MTISAQCNLQKLAFATSLAVTIVLSQGRAIGQVKHGSPIELAKADVSTAVRQDMANDVRI
VGSLTPIRRSTLTSRVSSTIIELPVQIGDVVNAGDLLVRFERGALESAVTGRKAEADALR
AQTDLAEAVLERNTRLSERRAASEATRLAALADVLDLRAQLRSKQAEVSDAERSLSHAEV
RAEFGGVIAARSVEEGQTVPLNTQLMTIVELNRLEVDAGVPTSRIPLIRLKQPVELTVEG
FPGRTFSGEVARISPTAEAGSRAVRVFIAVDNEEGLLRGGMFTIGDLRVDDQKDVIALPA
ASIRHDADGFFVLKVKAGVLQRRPVGLGRSWSDRDLVQVSGVSEGDVIVTAPLPDLVANT
PVIIEGI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgacgatatctgctcagtgcaatctccagaaactggcgttcgccacaagcttggccgtg
accatcgttctttcgcaaggtcgggcaattgggcaggttaaacacggtagcccgatcgag
cttgccaaagccgacgtaagcaccgccgtccggcaagacatggcaaacgacgtccgtata
gtcggctctctcacgcccattcgacgttctacactgacctcacgcgtatcctcgacgatc
attgagctacctgttcagatcggggacgtggtcaatgccggcgatctcctcgtccgtttc
gaaaggggagctctcgaatcggcggtgacggggcgaaaagcagaggcggatgcccttcgc
gcgcagaccgacctcgccgaggcagtgcttgagcgaaacacgcgacttagtgaacgacgc
gcggcatcggaggccacgaggcttgctgcgctggcggatgtgcttgatcttcgcgcgcag
ctaagatcgaaacaggccgaggtttcggatgccgaacgatcgctctcccatgcagaagtg
cgagccgagttcggtggcgttattgctgcgcgttcggttgaagagggccagacagttccg
ctgaatacccaactgatgactattgtcgagctcaatcggctggaagttgacgccggtgtt
cccacaagccggatcccgctcattcgcctcaagcagcccgtagagctgacggtagagggc
tttccgggccggacgttttccggagaggtcgctcgtatctcgcccaccgccgaagccgga
tcccgtgctgtgcgagtgttcatcgccgtcgacaacgaggaaggcctgttgagaggcgga
atgttcaccatcggcgatctaagagtagacgaccagaaggatgtcatcgcactaccggcg
gcttcaatccgacacgacgcagatggttttttcgttctcaaggtgaaagcgggcgttttg
caaaggcgacctgtcgggctcggcaggagttggagcgaccgtgatcttgtgcaggtgtcg
ggagtgagcgagggcgatgttatcgtaaccgccccattgcccgatctcgtcgccaatacg
cccgtgatcatcgaaggcatctga
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