Sulfitobacter mediterraneus: JNX03_06635
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Entry
JNX03_06635 CDS
T07747
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
smed
Sulfitobacter mediterraneus
Pathway
smed00300
Lysine biosynthesis
smed00550
Peptidoglycan biosynthesis
smed01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smed00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JNX03_06635
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JNX03_06635
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smed01011
]
JNX03_06635
Enzymes [BR:
smed01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
JNX03_06635
Peptidoglycan biosynthesis and degradation proteins [BR:
smed01011
]
Precursor biosynthesis
Amino acid ligase
JNX03_06635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QRD43750
LinkDB
All DBs
Position
complement(1357543..1359024)
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AA seq
493 aa
AA seq
DB search
MASPCVSLSSLGLTARGGANPDITGVAVDSRAVKDGFLFAAMPGSRVHGAEFIQYALRMG
AVAVLTDAEGAEIAADLMAEAGTAVVITDAPREALSRAAALWSGAQPQTMVAVTGTNGKT
SVSTFVRQIWIEMDLPAVNLGTTGVEGAWSAPLAHTTPEPITLHRTLAEAAQNGITHAAM
EASSHGLDQRRLDGVILRAAGFTNFTQDHLDYHQTFEAYFDAKAGLFSRVLPQDGTAVIN
IDDPKGVDMAAIAKARGCEVITVGRDGGDLHLTAQRFDATGQDLRFDWRGKTFQKRLNLI
GGFQGDNVLLAAGLVIACGGDPADVFDTIPHLTTVRGRMQLAATRDNGAAVFVDYAHTPD
AVATALAAMRPHVMGRLIAIVGAGGDRDAGKRPLMGAAAAENADLVIVTDDNPRSEEPAA
IRAAVLEGAPEATEVGDRAEAILRGVDMLGAGDALLVAGKGHETGQVVGDDILPFDDVEQ
ASVAVAALDGRLA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggccagcccgtgtgtttccctttcctcccttggtctgacggcacggggcggggccaat
cccgatatcactggcgttgcggtggacagccgcgccgtgaaagacggatttttgtttgcc
gcgatgcccggcagccgggtgcatggcgctgaatttatccaatatgcattgcgcatgggg
gcggtggcggtcctgaccgatgccgaaggggccgagattgccgcagatcttatggcggag
gcaggcacagctgttgtcatcaccgatgccccgcgtgaggccttgtcacgggcggcagcc
ttgtggtcgggggcgcagccccagacgatggtcgcggtcacgggcaccaatggcaaaacc
tcggtctcgacatttgtgcggcaaatctggatcgagatggatctgccagcggtcaacctg
ggcaccaccggcgttgaaggtgcatggtccgccccgttggcccataccacgccagagccg
atcacactgcaccggaccttggccgaggccgcgcagaacgggatcacccatgcggcgatg
gaggcctcgtcacatgggctggatcagcggcgattggacggtgtgatcctacgtgctgcc
ggatttaccaatttcactcaggatcatctggactatcaccagacgttcgaggcctatttt
gatgccaaggcgggactgttttcgcgggttttgccgcaggatggcacggcggtgatcaat
atcgacgaccccaagggcgtggacatggccgcgattgccaaggcgcgcggctgcgaggtg
atcacagtgggccgcgatggcggtgatcttcatctgacagctcagagatttgatgctacg
ggccaggatctccggtttgattggcgcggcaagacctttcaaaagcggctgaacctcatt
ggcggctttcagggcgacaatgtgctgttggcggcggggttggtcatcgcttgcggtggt
gatccggcggatgtgttcgacacgatcccgcatctgacgacggtgcgtggccggatgcaa
ctggccgcgacccgcgacaatggcgcggccgtgtttgtcgattatgcccatacgcctgat
gcggtggcgacggcactggcggcgatgcgcccccatgtgatggggcgtttgatcgccatt
gttggtgcgggcggcgaccgggatgcgggcaaacgtccgttgatgggcgcggcagcggcg
gaaaatgcggatctggtgatcgtgacggatgacaacccgcgctccgaagagccggcggcc
attcgcgccgctgtgctggaaggtgcgcccgaggcaaccgaggttggcgaccgtgccgag
gcgattctgcgcggcgtggacatgcttggggccggggatgcgttgctggttgcgggcaag
ggccatgaaaccgggcaagtggtcggtgatgacatcctgccctttgatgatgtggaacag
gccagcgttgcggtggccgcgctggacgggagactggcatga
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