Sinorhizobium meliloti GR4: C770_GR4Chr0197
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Entry
C770_GR4Chr0197 CDS
T02405
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
smeg
Sinorhizobium meliloti GR4
Pathway
smeg01501
beta-Lactam resistance
smeg01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
smeg00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
C770_GR4Chr0197
01503 Cationic antimicrobial peptide (CAMP) resistance
C770_GR4Chr0197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeg03036
]
C770_GR4Chr0197
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
smeg02000
]
C770_GR4Chr0197
01504 Antimicrobial resistance genes [BR:
smeg01504
]
C770_GR4Chr0197
Chromosome and associated proteins [BR:
smeg03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
C770_GR4Chr0197
Transporters [BR:
smeg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C770_GR4Chr0197
Antimicrobial resistance genes [BR:
smeg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
C770_GR4Chr0197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
CzcB_C
BSH_CzcB
Beta-barrel_RND_2
HH_CzcB
HH_AAEA_pHBA
BSH_CusB
DUF5801
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
AGA05182
LinkDB
All DBs
Position
complement(218975..220393)
Genome browser
AA seq
472 aa
AA seq
DB search
MVIFTFLPPLPARRNSVALRQKLTYIGVCILAFRYFPRRYRLRFTSLWDRAALAKRRDCG
RSFDNMDIAMRMNRPILAAALASVIFLAGCQKNEEQQAAAAAPPPSPVAVFTTKAEPLPI
TNELPGRITATRIAEVRPRISGIVVERVFEQGTMVKEGDVLYRIDPAPFQVKVDSAEATL
KRAQAVVDQAKRTADRQSRLKEAQVTAVQQYDDAIAALAQAEADVGIAEAGLAEAKLNLQ
YTNVTAPISGRIGRALITEGALVNTNDPQNLATIQQLDPIYADFTQSATDLIRLRKALKD
GQWMSAKNEAEVQLILDDGTPYALKGRLLFSEAAVDATTGQVTLRGEFPNPNNDLLPGMY
VRVQIQQGLEKDAITVPQQAVQRNNAGQSQVYVVNADNKVEFRNVTLGRTVGERWQVTSG
LKPGEKVIVEGFQKVGPGAPVQPSDWDPNAKPAPEQASASADAGEKPATEVK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttggtgatcttcacttttttgcctcccctgccggcgcgtcgaaactctgttgcactgcgg
cagaaattaacatacattggcgtctgtatattagctttccggtattttccacgccgatac
cggctccgcttcacctcactttgggaccgcgcagcgcttgcgaaacgccgcgactgcggc
cggtcctttgacaatatggacattgcgatgcgcatgaaccgaccgatattggccgccgcg
ctggcatccgtgatttttctcgcgggctgccagaagaatgaagaacagcaggcagcggct
gccgcccctccgccgtcgccggtcgccgtcttcacgacgaaggcggaaccgctgccgatc
accaacgaactgccgggccgcatcaccgccacccgcatcgccgaagtccgcccgcgcatc
tccggcatcgtcgtcgagcgggtgttcgagcagggcaccatggtcaaggaaggcgacgtg
ctctaccgcatcgacccggcaccgtttcaggtcaaggtcgacagcgccgaggcgacgctg
aagcgcgctcaggcggtggtcgatcaggccaagcggacggccgaccgccagtcgcggctg
aaggaggcgcaggtcaccgcggtgcagcagtacgacgatgccatcgcggccctcgcccaa
gccgaggccgatgtcggcatcgccgaggcagggctcgcggaggccaagctcaatctgcag
tatacgaacgtcacggctccgatcagcggccggatcggccgggcgctgatcaccgaaggc
gcgctcgtcaacaccaacgatccgcagaaccttgcgacgatccagcagctcgacccgatc
tatgccgacttcacccagtcggcgaccgacctgatccgcctgcgcaaggcgctgaaggac
ggccagtggatgagtgccaagaacgaggccgaggttcagttgatcctcgacgacggaacg
ccctacgcgctcaagggcaggctgctcttctccgaagccgccgtcgacgcgacgacgggc
caggtgacgctgcgcggcgaattccccaacccgaacaacgatctgctgccgggcatgtat
gtccgcgtccagatccagcagggtttggaaaaggacgcgatcaccgtgccgcagcaggcc
gtgcagcgcaacaatgccggccagtcgcaggtctatgtggtgaatgccgacaacaaggtt
gaattccgcaacgtcacgctcggacgcaccgtcggcgagcgctggcaggtgacctccggc
ctcaagcccggcgaaaaggtcattgtcgagggtttccagaaggtcggcccgggcgcgccc
gtgcagccatccgactgggacccgaatgcaaagcccgcgcccgaacaggccagcgcttcg
gcagatgccggcgaaaagcccgccaccgaagtgaagtga
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