Silurus meridionalis (southern catfish): 124375639
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Entry
124375639 CDS
T08004
Symbol
msl2b
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MSL2b
KO
K13164
male-specific lethal 2
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smeo03041
]
124375639 (msl2b)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124375639 (msl2b)
Spliceosome [BR:
smeo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
124375639 (msl2b)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MSL complex
124375639 (msl2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_10
MSL2-CXC
zf-RING_5
DUF6688_C
Motif
Other DBs
NCBI-GeneID:
124375639
NCBI-ProteinID:
XP_046690121
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All DBs
Position
21:158894..164468
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AA seq
600 aa
AA seq
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MNPVNATALFVSACRSVLLCDPQDPQALSELHRLLPFFRQSLSCLVCGNLLQNPIAPTNS
SCQHYVCKACKGKKMMMKPSCSWCKDYEQFEENRQLCILVDCYRKLCEYIAGSPLAKLIS
SEVGGDPDILALLNEGLSSEHTGGDEGFLLNLPHRSPDPSSSNTPPEDLQSLCLTEIKQQ
PPSPLGVNGLRDCNGLSNMDELTSGLPSPHTSVSVEVGSEMVKQEDFSSEIPVCEVVATT
EEELCHPSMDMCEFGEDIKHAGGTLLLSVEEVLRTLEPDPIPQVGCSTIPPSLSASGNIN
GPFGCSAASADSSRPLPSLPLDSAGVLVPQHPHHNPQPSLGISCSAVTPKVPRSNRKRSR
SESDSEKIQPLPISTIIRGPALGASVPVTIKCEPKALTLTTPNMTAVLNGGGLPKVGKAL
IVPNKPVKKSIEQHGPKKAYAKSKQSAPKTKDKTKERLVSNPLVPGSPTKVVYKKVQEKK
GCKCGRATQNPSVLTCRGQRCPCYSNRKACLDCICRGCQNSYMANGEKKLEAFAVPEKAL
EQTRLTLGINLTSIAMKNPGSGGGGTPGALNVTSAAGSPMASFLSAGPHEDEALDMRFDC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggtaaacgccacggctctgttcgtgtccgcgtgccgctcggtgctgctgtgc
gacccccaggaccctcaggctctgtctgagctccacagactgctgccattcttcagacag
tctctgtcctgcctggtgtgcgggaatctgctccagaatccgatcgctccgaccaactcc
tcgtgccagcattatgtctgcaaagcgtgcaaggggaagaagatgatgatgaagccgtcg
tgcagttggtgtaaagactacgagcagtttgaggagaacaggcaactgtgtattctggtg
gactgctacaggaagttgtgtgaatacatcgcaggttctcctctcgccaagcttatttcc
agtgaagtgggcggagatcccgacattctggctctgcttaatgagggtctctcatctgag
cacacgggaggagacgagggtttccttctaaacctgccgcatcgctctcccgatccctcg
agctcgaacactcctcctgaagatctccagtccctgtgtttgactgagatcaagcagcag
ccgccgagcccgctgggagtaaacggtcttcgggactgtaacgggctgagcaacatggac
gagctgacgagcggcttgccctcgccacacaccagcgtctcggtggaggtcggcagcgag
atggtgaagcaggaggacttcagcagtgagattccggtgtgtgaagtcgtggcaacgacc
gaagaagagctctgtcaccccagcatggatatgtgtgagtttggagaggatattaaacat
gcaggtggaactctcttactgagcgtggaggaggtgctaaggactctggagcccgatccc
attcctcaggtggggtgttccactattccaccgagcctcagtgcttcagggaatataaac
ggaccctttggatgttctgctgcctcggctgactcttcccgaccgcttccctcgcttccc
ctcgactctgcaggggtgttagttcctcagcatcctcatcacaacccacagccgtccttg
ggaatttcctgttccgctgtaactcccaaagttccacgctctaaccgcaagcgctcacgc
tctgagagtgacagtgagaagatccagcccctgcctatctccaccatcatcagagggccg
gctcttggtgcctcggtccccgttactataaagtgtgaacctaaagctctgacgctcacc
acacccaacatgaccgccgtcctgaacggtggaggacttcccaaagtgggcaaagctctg
attgtgcccaataaacccgtcaagaagagcattgagcagcacggacccaaaaaggcgtac
gcgaagtccaaacagagcgccccgaaaacgaaagacaagacgaaagagcgactggtgagt
aatcctctggtgccggggagtcccaccaaggtggtgtacaagaaagtgcaggagaagaag
ggctgtaaatgtggcagggccacccaaaacccaagtgttcttacatgtcggggtcagcgc
tgcccctgctactccaaccgcaaggcctgtctggactgcatatgccgcggctgccagaac
tcctacatggccaacggtgagaagaaactggaagcgttcgcggtgcccgagaaagccctg
gaacagacgaggctcacgctgggcatcaacctcaccagcatcgccatgaagaaccccggc
agcggcggcggcgggacccccggtgcgctgaacgtcacctcggcggcaggttcgccaatg
gcctcgttcctgtcggccgggcctcacgaggacgaggcgttggacatgaggtttgactgt
tga
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