KEGG   Silurus meridionalis (southern catfish): 124375693
Entry
124375693         CDS       T08004                                 
Symbol
actb2
Name
(RefSeq) actin, cytoplasmic 2
  KO
K05692  actin beta/gamma 1
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03082  ATP-dependent chromatin remodeling
smeo04145  Phagosome
smeo04210  Apoptosis
smeo04510  Focal adhesion
smeo04520  Adherens junction
smeo04530  Tight junction
smeo04810  Regulation of actin cytoskeleton
smeo04814  Motor proteins
smeo04820  Cytoskeleton in muscle cells
smeo05100  Bacterial invasion of epithelial cells
smeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    124375693 (actb2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    124375693 (actb2)
  09143 Cell growth and death
   04210 Apoptosis
    124375693 (actb2)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124375693 (actb2)
   04520 Adherens junction
    124375693 (actb2)
   04530 Tight junction
    124375693 (actb2)
  09142 Cell motility
   04814 Motor proteins
    124375693 (actb2)
   04820 Cytoskeleton in muscle cells
    124375693 (actb2)
   04810 Regulation of actin cytoskeleton
    124375693 (actb2)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124375693 (actb2)
   05100 Bacterial invasion of epithelial cells
    124375693 (actb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smeo03021]
    124375693 (actb2)
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124375693 (actb2)
   03036 Chromosome and associated proteins [BR:smeo03036]
    124375693 (actb2)
   03029 Mitochondrial biogenesis [BR:smeo03029]
    124375693 (actb2)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:smeo04812]
    124375693 (actb2)
   04147 Exosome [BR:smeo04147]
    124375693 (actb2)
Transcription machinery [BR:smeo03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     124375693 (actb2)
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     124375693 (actb2)
Chromosome and associated proteins [BR:smeo03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     124375693 (actb2)
    NuA4 complex
     124375693 (actb2)
  Chromatin remodeling factors
   BAF complex
    124375693 (actb2)
   PBAF complex
    124375693 (actb2)
   GBAF(ncBAF) complex
    124375693 (actb2)
   SWR1 complex
    124375693 (actb2)
Mitochondrial biogenesis [BR:smeo03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    124375693 (actb2)
Cytoskeleton proteins [BR:smeo04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     124375693 (actb2)
Exosome [BR:smeo04147]
 Exosomal proteins
  Proteins found in most exosomes
   124375693 (actb2)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 124375693
NCBI-ProteinID: XP_046690190
LinkDB
Position
22:8695993..8699700
AA seq 375 aa
MDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggatgatgaaattgccgcactggttgttgacaacggatccggtatgtgcaaggccgga
tttgctggagatgatgctccccgtgctgtctttccatccattgtgggtcgcccaagacac
cagggtgtgatggttggtatgggacagaaggacagctatgttggtgatgaggctcagagc
aaaagaggtatcctgaccctgaaataccccattgagcacggtattgtcaccaactgggat
gatatggagaagatctggcatcataccttctacaacgagctgcgtgttgcccctgaggag
caccctgtcctgcttaccgaagctcccctgaaccccaaagccaacagggaaaagatgacc
cagattatgtttgagaccttcaacaccccagccatgtacgttgccatccaggctgtgctg
tccctgtacgcctctggtcgtaccactggtattgtgatggactctggtgatggtgtgacc
cacactgtgcccatctatgaaggttacgctcttccccatgccatcctccgtctggacttg
gctggtcgtgacctgactgactacctcatgaagatcctgaccgagagaggctacagcttc
actaccacagctgagagggaaattgtccgtgatatcaaggagaagctgtgctatgttgct
cttgactttgagcaggagatgggcactgctgcctcttcttcctccctggagaagagctat
gagctgcctgacggacaggtcatcaccattggtaatgagaggttcaggtgtcccgaggct
ctcttccagccatctttcctgggtatggagtcctgtggaatccatgagactaccttcaac
tcgatcatgaagtgtgatgtggacatccgtaaggatctgtatgccaacaccgtactgtct
ggtggtaccaccatgtacccaggcattgcagacaggatgcagaaggaaatcacatccctg
gcccccagcacaatgaaaattaagatcattgccccacctgagcgcaaatactctgtctgg
atcggaggctccatcctggcctccctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgagtccggaccctccatcgtccaccgcaaatgcttctaa

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