Silurus meridionalis (southern catfish): 124375693
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Entry
124375693 CDS
T08004
Symbol
actb2
Name
(RefSeq) actin, cytoplasmic 2
KO
K05692
actin beta/gamma 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03082
ATP-dependent chromatin remodeling
smeo04145
Phagosome
smeo04210
Apoptosis
smeo04510
Focal adhesion
smeo04520
Adherens junction
smeo04530
Tight junction
smeo04810
Regulation of actin cytoskeleton
smeo04814
Motor proteins
smeo04820
Cytoskeleton in muscle cells
smeo05100
Bacterial invasion of epithelial cells
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124375693 (actb2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124375693 (actb2)
09143 Cell growth and death
04210 Apoptosis
124375693 (actb2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
124375693 (actb2)
04520 Adherens junction
124375693 (actb2)
04530 Tight junction
124375693 (actb2)
09142 Cell motility
04814 Motor proteins
124375693 (actb2)
04820 Cytoskeleton in muscle cells
124375693 (actb2)
04810 Regulation of actin cytoskeleton
124375693 (actb2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124375693 (actb2)
05100 Bacterial invasion of epithelial cells
124375693 (actb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smeo03021
]
124375693 (actb2)
03019 Messenger RNA biogenesis [BR:
smeo03019
]
124375693 (actb2)
03036 Chromosome and associated proteins [BR:
smeo03036
]
124375693 (actb2)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124375693 (actb2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124375693 (actb2)
04147 Exosome [BR:
smeo04147
]
124375693 (actb2)
Transcription machinery [BR:
smeo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124375693 (actb2)
Messenger RNA biogenesis [BR:
smeo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
124375693 (actb2)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
124375693 (actb2)
NuA4 complex
124375693 (actb2)
Chromatin remodeling factors
BAF complex
124375693 (actb2)
PBAF complex
124375693 (actb2)
GBAF(ncBAF) complex
124375693 (actb2)
SWR1 complex
124375693 (actb2)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
124375693 (actb2)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
124375693 (actb2)
Exosome [BR:
smeo04147
]
Exosomal proteins
Proteins found in most exosomes
124375693 (actb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
124375693
NCBI-ProteinID:
XP_046690190
LinkDB
All DBs
Position
22:8695993..8699700
Genome browser
AA seq
375 aa
AA seq
DB search
MDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaaattgccgcactggttgttgacaacggatccggtatgtgcaaggccgga
tttgctggagatgatgctccccgtgctgtctttccatccattgtgggtcgcccaagacac
cagggtgtgatggttggtatgggacagaaggacagctatgttggtgatgaggctcagagc
aaaagaggtatcctgaccctgaaataccccattgagcacggtattgtcaccaactgggat
gatatggagaagatctggcatcataccttctacaacgagctgcgtgttgcccctgaggag
caccctgtcctgcttaccgaagctcccctgaaccccaaagccaacagggaaaagatgacc
cagattatgtttgagaccttcaacaccccagccatgtacgttgccatccaggctgtgctg
tccctgtacgcctctggtcgtaccactggtattgtgatggactctggtgatggtgtgacc
cacactgtgcccatctatgaaggttacgctcttccccatgccatcctccgtctggacttg
gctggtcgtgacctgactgactacctcatgaagatcctgaccgagagaggctacagcttc
actaccacagctgagagggaaattgtccgtgatatcaaggagaagctgtgctatgttgct
cttgactttgagcaggagatgggcactgctgcctcttcttcctccctggagaagagctat
gagctgcctgacggacaggtcatcaccattggtaatgagaggttcaggtgtcccgaggct
ctcttccagccatctttcctgggtatggagtcctgtggaatccatgagactaccttcaac
tcgatcatgaagtgtgatgtggacatccgtaaggatctgtatgccaacaccgtactgtct
ggtggtaccaccatgtacccaggcattgcagacaggatgcagaaggaaatcacatccctg
gcccccagcacaatgaaaattaagatcattgccccacctgagcgcaaatactctgtctgg
atcggaggctccatcctggcctccctgtccaccttccagcagatgtggatcagcaagcag
gagtacgatgagtccggaccctccatcgtccaccgcaaatgcttctaa
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