Silurus meridionalis (southern catfish): 124375938
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Entry
124375938 CDS
T08004
Name
(RefSeq) LOW QUALITY PROTEIN: exostosin-1c-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
smeo01100
Metabolic pathways
Module
smeo_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
124375938
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smeo01003
]
124375938
Enzymes [BR:
smeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
124375938
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
124375938
Glycosyltransferases [BR:
smeo01003
]
Glycan extension
O-Glycan
124375938
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
124375938
NCBI-ProteinID:
XP_046690705
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All DBs
Position
22:complement(9278628..9328785)
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AA seq
737 aa
AA seq
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MQARKKYVLLGLCTCCWLLLFYWGGLHERLLGLVTRRRAEVLRPWPDWLDRAFLPAYVSH
VELQNEAGPGESPMLRRQTWNSIYKDSRCRMETCFDFNRCHGRDGFRVYVYPTEKGDRVS
ESYRKILASVAESRYYTSDPREACLFVLGIDTLDRDQLSTQFVPNVDERIRGYPLWNDGR
NHVVFNLYSGTWPNYTEDLGFNIGQALLAKASLNTEHFRPGFDISIPLFSKEHPQKGGER
GWLLRNIVPPKRKYLLMFKGKRYLTGIGSDTRNALHHIHNGKDIISLTTCRHGKDWEKHK
DARCDHDNEEYERFDYQELLHNSTFCLVPRGRRLGSFRFLESLQAACIPVLLSNGWELPF
SDVIQWNQAVIEGDERLLLQVPSTVRAVGTDRVLALRQRTQMLWEAYFSSVDKIVLTTLE
IIKDRVYAHISRNKFMWNSLPGGLLVLPEYSVHLAHYPFYYLNLGVMPGQEFTAVIHATS
PLVSQSQPIMKLLQVVSKSKYCSQIIILWNSEKPPPHRSKWPPMPVPLVVTDGRRKTSSR
FLPHVAIETEAVLSLDEDSVLLTSEVNFAFLVWRSFPERIVGYPPRSHFWDPVKKIWGYT
SKWTNEYSIVLTGAAFYHRYYHYLFSHYLPPSLRALVDRSSNCEDILMNFLVSSVTHLPP
IKVAQRKQYKEMPNPQSTNMAPWANPEHFTQRQECINTFASWFGYMPLVHSQLRLDPVLF
KDHVSVLRKXYKDLERA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgcgcaagaagtatgtgctgctgggtctgtgtacttgctgctggctgctgctc
ttctactggggtggcctacacgagcggctcttgggcctggtgacacgccggagggccgaa
gtgctgcgcccatggcctgactggctggaccgagcctttttaccagcgtacgtcagccat
gtagagctgcagaatgaagcaggacctggagagtcacctatgctgcgacggcagacctgg
aacagcatctacaaggatagccggtgtcgaatggaaacctgctttgactttaatcgctgt
catggacgtgatggctttcgcgtgtatgtatatccaactgagaagggcgatcgtgtgtcg
gagagctaccgcaaaatcctggcctcagtggccgagtccaggtactacacatctgaccca
cgtgaggcctgcctgtttgttttgggcattgacacactggaccgtgaccaattgtcgact
cagtttgtcccaaatgttgacgagcgcatccgtggctacccactctggaatgatggacgc
aaccacgtggtatttaatctttactcaggcacatggccgaactatacggaggacctgggt
tttaacataggccaggccctcttggccaaagccagtctgaacacagagcacttccggccc
ggctttgacatctccattccgttattttcgaaagaacatccacagaagggtggcgaacgc
gggtggttacttcgcaatatcgtaccaccaaagaggaaatatttgctcatgttcaaagga
aaacgctacctaacgggtattggctctgacacacggaatgcactgcatcatatccataat
ggcaaagacatcatatccttaacaacctgccgccatgggaaggactgggaaaaacacaag
gatgcccgctgtgaccatgacaacgaggaatacgagaggtttgactatcaagagctgctc
cacaactccaccttctgcctggttccacgtggacgacgcttgggatcctttcgctttctt
gagtctttgcaggcggcctgtatcccagtgttgctcagcaacgggtgggagctgcccttc
tctgatgtcatccagtggaatcaggcagttatcgagggagatgagaggttgctgcttcag
gtgccctctacagtgcgggcagtgggcactgaccgcgtgctggcactaagacaacgtaca
cagatgctttgggaggcctacttctcctcagtggacaagattgttctcaccactttagag
atcattaaagatagggtgtatgcccacatctcaagaaataagttcatgtggaattctttg
cccggtggacttctggtgctgcccgaatattcagtccacctggcccattaccctttctac
tatttgaaccttggagtcatgcctggccaggaatttactgcagtcatccatgctacatct
ccgctggtttcccagtctcagccaattatgaagctcctgcaagtggtgtctaaatccaaa
tactgctcacagattatcatcttgtggaacagtgaaaagccgccccctcacaggagcaaa
tggccgcccatgccagtgccccttgttgtcacagatggtagaaggaaaacaagcagccgt
ttcctgccgcatgttgcaatcgagactgaagcggtacttagccttgatgaagactcagtg
ctactgactagtgaggtcaactttgcattccttgtatggcggagtttccccgaaagaatt
gtcggatatccacccaggagtcatttctgggatccagtaaagaaaatttggggttacacc
agcaaatggactaatgaatactcaatcgtgctgacaggagcagccttttatcacaggtat
tatcattatctgttctcacattatttgcccccttcattacgggcgttagtggaccgcagc
tcaaactgtgaagatatcctgatgaacttcttagtgtcgtctgtgactcacctgccacct
attaaagtggctcaaagaaagcagtataaagagatgcctaatccacagagcaccaacatg
gccccctgggcaaaccctgagcacttcacccagagacaagagtgcataaacacctttgca
agctggttcggctacatgcctcttgtgcactcgcagctccgtctcgaccctgttcttttc
aaggaccacgtgtctgtcctgcgcaaanagtataaggaccttgagcgtgcttga
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