Silurus meridionalis (southern catfish): 124376366
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Entry
124376366 CDS
T08004
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00514
Other types of O-glycan biosynthesis
smeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
124376366 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124376366 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
smeo01003
]
124376366 (lfng)
Enzymes [BR:
smeo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
124376366 (lfng)
Glycosyltransferases [BR:
smeo01003
]
Glycan extension
O-Glycan
124376366 (lfng)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
124376366
NCBI-ProteinID:
XP_046691373
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Position
22:complement(8010803..8018407)
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AA seq
380 aa
AA seq
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MLKSPSRKTALSAAGAAVTCVALLVVLAQQRRSAPRDARGDAEVGMRSLQSVAEVEVDGG
VQSDQSGLDGGKKKGFSAYFSKLTRSRREAADKPNAALSGAPSSAPAEELRLDDLFIAVK
TTKKFHQPRLHLLLETWISRNVQQTYIFTDGEDEELKKKMGNHVINTNCSAAHSRQALSC
KMAVEYDKFIESGKKWFCHVDDDNYVNVRTLVKLLSQYPHTQDLYIGKPSLDRPIEATER
LGDNKMRPVNFWFATGGAGFCISRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYVIES
VLGVPLTRSNLFHSHLENLQQVSRLEVHKQITLSYGMFENKRNIINMKGVFPVEEDPSRF
KSVHCLLYPDTPWCPPQVTY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaagtcccagcaggaaaactgcgctctccgcagcaggagcggccgtcacctgc
gtggcgctgctcgtggtgctcgcgcagcagcgcaggagcgcgccccgtgacgcgcgcggg
gacgcggaggtggggatgcgctcactacagagtgtggccgaggtggaggtggatggagga
gtgcagagcgaccaatcaggcctggacggaggaaagaaaaagggattttccgcctatttt
tccaaactgacgcggagcaggagagaggctgcggacaaacccaacgctgcgctctcgggc
gctccatccagcgcgccggctgaagagctgcgcctcgacgacctcttcatcgccgtgaag
accaccaagaagttccaccagccccggcttcacttgcttttggaaacgtggatttcgaga
aacgttcaacagacatacatcttcacagatggggaggatgaggagttgaagaagaaaatg
ggaaaccatgtcattaacaccaactgctctgctgctcacagccgccaggctctgtcctgc
aagatggctgtggagtatgacaagtttattgaatcaggaaaaaagtggttctgccatgtg
gatgatgataactatgtgaacgtcaggacacttgtcaagctgctttctcaatatcctcac
actcaggacttgtacattggcaaacccagcctggacaggcccattgaggctacagagaga
ctcggggacaacaagatgagacccgttaatttctggtttgccactgggggagctggtttc
tgcatcagccgtggtctggctctgaaaatgagcccttgggcaagtggtggtcatttcatg
aacacagcagaaaagatccgcctccctgatgactgcaccattggttacgtcatcgagtca
gttctaggggttccacttacacgtagtaacctgttccactcacatctagagaacctgcaa
caggtgtctcgattagaagtacacaaacagattacactgagttacggtatgtttgagaac
aagaggaatatcatcaacatgaaaggagtttttccggttgaggaggacccatccaggttt
aagtctgtgcactgcctgctctatccggatactccctggtgtcctcctcaggttacctat
taa
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