Silurus meridionalis (southern catfish): 124377796 Help Entry 124377796         CDS       T08004                                  Symbol actb1 Name (RefSeq) actin, cytoplasmic 1   KO K05692   actin beta/gamma 1 Organism smeo  Silurus meridionalis (southern catfish) Pathway smeo03082   ATP-dependent chromatin remodeling smeo04145   Phagosome smeo04210   Apoptosis smeo04510   Focal adhesion smeo04520   Adherens junction smeo04530   Tight junction smeo04810   Regulation of actin cytoskeleton smeo04814   Motor proteins smeo04820   Cytoskeleton in muscle cells smeo05100   Bacterial invasion of epithelial cells smeo05132   Salmonella infection Brite KEGG Orthology (KO) [BR:smeo00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     124377796 (actb1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     124377796 (actb1)   09143 Cell growth and death    04210 Apoptosis     124377796 (actb1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     124377796 (actb1)    04520 Adherens junction     124377796 (actb1)    04530 Tight junction     124377796 (actb1)   09142 Cell motility    04814 Motor proteins     124377796 (actb1)    04820 Cytoskeleton in muscle cells     124377796 (actb1)    04810 Regulation of actin cytoskeleton     124377796 (actb1)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     124377796 (actb1)    05100 Bacterial invasion of epithelial cells     124377796 (actb1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:smeo03021]     124377796 (actb1)    03019 Messenger RNA biogenesis [BR:smeo03019]     124377796 (actb1)    03036 Chromosome and associated proteins [BR:smeo03036]     124377796 (actb1)    03029 Mitochondrial biogenesis [BR:smeo03029]     124377796 (actb1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:smeo04812]     124377796 (actb1)    04147 Exosome [BR:smeo04147]     124377796 (actb1) Transcription machinery [BR:smeo03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      124377796 (actb1) Messenger RNA biogenesis [BR:smeo03019]  Eukaryotic type   mRNA surveillance and transport factors    Factors involved in mRNA localization     Factors that have mRNA localization signals      124377796 (actb1) Chromosome and associated proteins [BR:smeo03036]  Eukaryotic type   Histone modification proteins    HAT complexes     TIP60 complex      124377796 (actb1)     NuA4 complex      124377796 (actb1)   Chromatin remodeling factors    BAF complex     124377796 (actb1)    PBAF complex     124377796 (actb1)    GBAF(ncBAF) complex     124377796 (actb1)    SWR1 complex     124377796 (actb1) Mitochondrial biogenesis [BR:smeo03029]  Mitochondrial quality control factors   Mitochondrial dynamics    Actin cytoskeleton organization     124377796 (actb1) Cytoskeleton proteins [BR:smeo04812]  Eukaryotic cytoskeleton proteins   Actin filaments / Microfilaments    Actins     Actins      124377796 (actb1) Exosome [BR:smeo04147]  Exosomal proteins   Proteins found in most exosomes    124377796 (actb1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Actin Motif Other DBs NCBI-GeneID:  124377796 NCBI-ProteinID:  XP_046693036 LinkDB All DBs Position 24:complement(20365787..20369573) Genome browser AA seq 375 aa AA seqDB search MDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS GGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ EYDESGPSIVHRKCF NT seq 1128 nt NT seq  +upstreamnt  +downstreamnt atggatgaggaaatcgctgctctggtggtcgacaacggctccggtatgtgcaaagccggt tttgctggagatgatgcacctcgtgctgtcttcccctccatcgttggtcgtcccaggcat cagggtgtgatggttggtatgggccagaaggattcctacgttggagacgaggctcagagc aagagaggtatcctgactctgaagtaccccattgagcatggtattgtcaccaactgggac gacatggagaagatctggcaccacaccttctacaacgagctgcgtgtagcccccgaagag cacccagtccttcttactgaggcccccctgaaccccaaagccaacagggagaagatgacc cagatcatgttcgagaccttcaacacacccgccatgtacgtcgccatccaggccgtgctg tccctgtacgcttctggtcgtaccactggtatcgtgatggactctggagatggtgtcacc cacaccgtgcccatctacgagggttatgctctgccccacgccattctgcgtctggacctg gctggccgtgacctcaccgactacctgatgaagatcctgaccgagcgtggctacagcttc accaccactgccgagcgtgagatcgtgcgtgacatcaaggagaagctgtgctacgttgct ctggacttcgagcaggagatgggcaccgccgcctcctcgtcctctctggagaagagctac gagctgcccgacggacaggtcatcaccatcgggaatgagcgtttccgctgccctgaggct ctcttccagccctctttcctgggtatggaatcttgcggtatccatgagaccaccttcaac tccatcatgaagtgtgacgtcgacatccgtaaggatctgtacgccaacactgtgctgtct ggtggtaccaccatgtaccctggcatcgctgaccgtatgcagaaggagatcacctccctt gccccctccaccatgaagatcaagatcattgctcctcctgagcgtaagtactccgtatgg attggtggctccatcctggcctctctctccaccttccagcagatgtggatcagcaagcag gagtacgatgagtccggcccatccatcgtccacaggaagtgcttctaa

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