Silurus meridionalis (southern catfish): 124378199
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Entry
124378199 CDS
T08004
Symbol
ret
Name
(RefSeq) LOW QUALITY PROTEIN: proto-oncogene tyrosine-protein kinase receptor Ret
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124378199 (ret)
04020 Calcium signaling pathway
124378199 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124378199 (ret)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124378199 (ret)
Protein kinases [BR:
smeo01001
]
Receptor tyrosine kinases (RTK)
RET family
124378199 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD4
RET_CLD1
RET_CRD
Cadherin
Pkinase_fungal
RIO1
Motif
Other DBs
NCBI-GeneID:
124378199
NCBI-ProteinID:
XP_046693699
LinkDB
All DBs
Position
2:complement(14676421..14697259)
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AA seq
1065 aa
AA seq
DB search
MGRTRAFTLWGDTVLVLLLLWEGSWGLYFPQTYSEDIYVGQAAGTPVLQVHAMQDRASEQ
PYFCLYWWTLQKSVPYASWFHIDTATGVIYMNKTLDWSDFESISSSWPTKTKRLTLKVSA
APVKTQCTKLNNVEVSLTFFNATAPTCGQITRQRLCSRVQEIKTHIKENRLPGPLLQLRR
FTLADLCPNYTISYSLETEIPVPFAVNVSTSELIVTAPVDREVKEVYNLSIVCSVQTEKI
SHTAVTTLNIIIYDEDDSPPYVNGTDTEDVLIAFSRSEGAVFGNMFVYDRDTTSAYHKEQ
SQNKYEWTLLTNDSWIKNTFTIEQNFSEEKLIFGNVRGTVYKYKLRLKRNIPVDENRSFQ
LDYLVNDTTFHGPEGTVMLHFNVTILAVPISFSNITYFFVLSRKSMTYSQIGKVCVDNCL
KFMGIEIEYHLELSDRNLSANAQSCYTAVDVARNLEYMSGVLYVNDTEPLRRPECQELQY
VLVAHEKHKQLEAKTIVIIILKAEVIIGQHSLACAEKRQHGECEIFRGLGTPTGRCQWRQ
GTEKVISTNYSTCSPDLRTCPDGYCDVIEXKNISICPQDCTREPVIGGHEKGLMLGIKAG
HGTCYCYLEKCFCEQDDMEEAICEDMCKTVIATAVLLSFIVSILLSSYFIHRYHKNTPKP
PIASAEMTFRRPAQSYPISYSANNVRRGSLDSMENQVAIDTFKIPEDPKWEFPRKNLVLG
KTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASHSELRDLLSEFTLLKQVNHPHV
IKMYGACSQDGPLYLIVEYAKYGSLRNFLRESRKVGPSYMGNDANRNSSYLENPDERALT
MGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVK
RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTG
YRMEKPENCTEEMYSLMLRCWKQEPDKRPTFSEISKELEKMMVKSRDYLDLAASTPADAL
LYDDTLSEEDTPLVDCNNAPLPRTLPSTWIENKLYGRISHAFTRF
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggacacgggcttttactctgtggggagacaccgtcctggtccttttgcttctc
tgggaaggctcgtggggactttactttcctcaaacatactcagaggacatttatgttggc
caggcagctggtacaccagtgctgcaggtgcacgccatgcaggatagagcttcagagcag
ccatacttctgcctgtactggtggacgctccagaaatctgttccttatgcatcatggttc
catatcgacactgccacgggagtgatctacatgaacaaaactctggattggagtgacttt
gagtcaatatctagcagttggcctacaaagaccaagagattgaccctgaaagtgtcagca
gcccctgtgaaaacgcagtgcacaaagttgaataatgtggaggtcagtcttacattcttc
aatgccacagcgcccacatgtggccaaattacgagacaaagactgtgttcacgtgttcaa
gagataaaaactcatataaaggagaaccgcttgcctggacctctgcttcagctccgtcgc
tttacccttgctgacctctgccccaactacaccatcagctacagcctggaaacagagatt
ccagtgccatttgcagtcaatgtctccacttctgagctgatagtcacagcacctgtagat
cgtgaggtgaaggaggtttataatctgtcgatagtgtgttcagtacaaactgaaaaaata
tcacacactgctgtgactactttgaatatcattatatatgatgaggatgacagtcctccc
tatgtgaatggcacagacactgaggacgtgcttatagcgtttagccgcagtgagggagct
gtgtttggcaatatgtttgtttacgacagagacacgacttctgcctatcacaaggaacag
agccagaataagtatgaatggacattactgacgaatgactcctggattaaaaacacattt
accattgaacagaactttagtgaggaaaagctcatctttggcaacgttcgagggacagtc
tataagtacaagctgcgtctcaaaaggaacattccagtagatgagaatcgctcatttcag
ttggactatctggtcaacgacactacatttcacggccctgagggaactgtgatgctgcat
ttcaatgttactattttggctgttcctattagcttcagtaatatcacttacttctttgtg
ctgtctcggaagtcgatgacctactctcagattggaaaagtatgtgtggacaactgcctg
aagttcatgggtatagaaattgaataccatttagagttgagtgacaggaacctctcagct
aatgctcagtcctgctacacagcggttgatgtggctcggaatctggagtacatgtctggc
gttctctatgtaaatgacacagagccgctgcgcaggcctgaatgccaggagctgcagtat
gtgcttgttgctcatgagaagcacaaacagcttgaggcaaaaacaatagtcatcatcatt
ttgaaggcagaggtaatcattggacagcattctctggcctgtgcagagaaaagacagcat
ggggagtgtgagatattcagaggcctgggaactcccactgggagatgtcagtggagacaa
ggcacagaaaaagtgatatcaacaaattactccacttgttctccagacctgcgtacatgt
ccggatggctactgtgatgtgattgaannaaaaaatatatccatatgtccacaggattgc
actcgtgagccagttattggaggccatgagaaaggcctgatgcttggcattaaggcaggg
catggaacctgctactgctatttggagaagtgcttttgtgagcaggatgatatggaagag
gcaatatgcgaagatatgtgtaagactgtcatagccacagcagttcttttgtcctttatc
gtctccatcctcctctcctcctacttcatccaccggtatcataagaacacccccaaacct
cccatcgcttcagctgaaatgactttccgtaggcctgcccagtcctatcctatcagctac
tcagccaacaatgttcgacgaggatctctggactccatggaaaaccaggtggccatcgac
accttcaagatacctgaggatccaaagtgggaattcccacgaaagaaccttgtcctgggt
aaaactcttggtgagggagagtttgggaaggttgtaaaagcaacggcattccggctcaaa
ggaaaggcgggatacactactgtagctgtaaaaatgttaaaagaaaacgcctctcacagt
gaacttcgtgaccttctgtcagaattcaccttgctaaagcaggtcaaccatccacatgta
ataaaaatgtatggagcttgtagccaggatggtcccctgtatctaattgttgaatatgcc
aagtatggatcgctccgaaacttcctgagagagagccggaaagtagggcccagctatatg
ggcaatgatgctaaccgaaactccagctaccttgagaatccggatgaaagagctctgacc
atgggagacctcatatcgttcgcctggcagatctccagaggaatgcagtacctggctgaa
atgaagcttgttcatagagatcttgcggccaggaacgtacttgtagcagagggcaggaag
atgaagatatcagactttggtttgtctcgggatgtctatgaggaagactcctatgtaaag
cggagcaagggtcgtatccctgtcaaatggatggccattgagtccttgtttgaccatata
tataccacccaaagtgatgtctggtctttcggggtgctgttatgggaaattgtgaccctg
ggtggaaacccttacccaggaattgcgcctgagcggctctttaatcttctcaagactggc
tacaggatggaaaaacctgagaactgcactgaggaaatgtatagtctgatgcttcgctgc
tggaagcaagaaccagataagagaccaaccttcagtgagatcagcaaagagctggagaag
atgatggtgaaaagcagagattatctggatctggcagcttccactccggcagatgccctg
ttatatgacgacactctgtccgaagaggacacccctctagtggactgtaataacgcccct
ctccctcgaaccctcccttccacttggattgaaaacaagctctatggtagaatttcccat
gcattcactcgattctaa
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