Silurus meridionalis (southern catfish): 124378372
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Entry
124378372 CDS
T08004
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124378372 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smeo03400
]
124378372 (nthl1)
Enzymes [BR:
smeo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
124378372 (nthl1)
DNA repair and recombination proteins [BR:
smeo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124378372 (nthl1)
Prokaryotic type
124378372 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
124378372
NCBI-ProteinID:
XP_046693971
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All DBs
Position
24:4084296..4090115
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AA seq
465 aa
AA seq
DB search
MRDSDTREYLRNKIVKKLKINMKSSSRYFGNVRNVVSGISHADTADKTSSAGRGIRRLTR
RMTEETSTGIKEEPDEERAICDLQGAPHGHSGLQKLTVTVEPKEKPGDGHTPPPRTLRRA
HTKIEYEDEAGTCIKKERWEPPFWRRQLSFIREMRRGRDAPVDRMGAEKCYDPQAPPEVM
RYQVLVSLMLSSQTKDQVTAAAMERLRANDLSVTSILNMDKDKLGQLIYPVGFWKTKVKY
LKEATEMIHCEYGGDIPDTLEGLMRLPGVGPKMAHLAMAIAWKRVSGIGVDTHVHRISNR
LGWTSSSTKNPEETRRALEEWLPRDLWCEINWLLVGFGQQVCLPVSPLCSSCLNQHICPA
AHTASPTRRPQPGSPPCPGEPAGLPKNHDTKPIKEEHVTVITSHLQRDRHRAAHVKERGD
ESQEEAEARVETTKVTCRGRRRDEGKDGEKRASPQRLRRTRQRKR
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgactcagacacgcgtgaatacttgcggaataaaatcgtaaaaaaattaaaaata
aacatgaaaagcagctcgcgttatttcgggaatgtgagaaacgtcgtgtcagggatttca
cacgccgacaccgcggataaaacctcttcagcaggaagaggaatccggagactgacacgc
aggatgacggaggaaacttctaccgggattaaagaagaaccggacgaggaacgtgccatt
tgtgacctgcagggggcgccacatggacacagtggtttacagaagttgaccgtcacagta
gagcccaaggaaaaacctggggatggccacacccctccaccacgcaccttgaggagggcc
cacacaaagatcgagtatgaagacgaggcggggacctgcatcaagaaagagcgctgggag
ccgcctttttggaggaggcagctgtccttcatcagggagatgcggcgtggacgggacgct
ccggtggacagaatgggggcagagaagtgctacgacccccaggctccaccagaggtgatg
cgttaccaggtgttggtttctctgatgttgtctagtcagacgaaggatcaggtgacggct
gcagccatggagcgactgcgtgcaaacgacctcagcgtgacctccatcctcaacatggac
aaggacaaactgggccaactgatctaccctgttggcttctggaagactaaggtgaagtac
ctgaaagaggcgacagagatgatccactgtgagtacggaggcgacatccccgacacgcta
gagggtttaatgcgtcttcctggtgtcggccctaagatggcgcacctggccatggccatt
gcctggaaacgggtctcaggaatcggagtggacacgcacgttcaccggatctctaacaga
ctgggatggacttcgagctccaccaagaacccggaggaaacccgtcgagcgctggaggag
tggctcccgagggatctgtggtgtgagataaactggttgttggtgggatttggtcagcag
gtctgtttacccgtctcacctttgtgctccagctgtttgaaccagcacatctgtcccgcc
gctcacaccgcctcgccgacccgcaggccccaaccaggctctcccccgtgtcccggggag
cctgcagggctgccgaagaaccatgacacgaaaccgatcaaggaggaacacgtgactgtc
atcacgtctcatctacaaagagacaggcacagagcggcccacgtgaaagagcgaggagac
gagtcgcaggaagaggctgaggcaagagtggagacgacaaaagtgacatgtaggggacgg
agaagggacgaggggaaagacggagagaagcgtgcgagtcctcagagactgagaagaacc
agacagagaaaacgctga
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