Silurus meridionalis (southern catfish): 124378726 Help Entry 124378726         CDS       T08004                                  Symbol traf2b Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism smeo  Silurus meridionalis (southern catfish) Pathway smeo04010   MAPK signaling pathway smeo04137   Mitophagy - animal smeo04141   Protein processing in endoplasmic reticulum smeo04210   Apoptosis smeo04217   Necroptosis smeo04621   NOD-like receptor signaling pathway smeo04622   RIG-I-like receptor signaling pathway smeo04920   Adipocytokine signaling pathway smeo05132   Salmonella infection smeo05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:smeo00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     124378726 (traf2b)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     124378726 (traf2b)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     124378726 (traf2b)   09143 Cell growth and death    04210 Apoptosis     124378726 (traf2b)    04217 Necroptosis     124378726 (traf2b)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     124378726 (traf2b)    04622 RIG-I-like receptor signaling pathway     124378726 (traf2b)   09152 Endocrine system    04920 Adipocytokine signaling pathway     124378726 (traf2b)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     124378726 (traf2b)   09171 Infectious disease: bacterial    05132 Salmonella infection     124378726 (traf2b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:smeo03019]     124378726 (traf2b)    04121 Ubiquitin system [BR:smeo04121]     124378726 (traf2b) Enzymes [BR:smeo01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      124378726 (traf2b) Messenger RNA biogenesis [BR:smeo03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      124378726 (traf2b) Ubiquitin system [BR:smeo04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     124378726 (traf2b) SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-RING_5 zf-C3HC4_2 zf-C3HC4_4 CCDC170_1st TRAFD1-XIAF1_ZnF RING_XB3-XBAT31 MC5 zf-RING_6 ADIP zf-RING_UBOX Motif Other DBs NCBI-GeneID:  124378726 NCBI-ProteinID:  XP_046694423 LinkDB All DBs Position 25:complement(4507978..4524486) Genome browser AA seq 527 aa AA seqDB search MISIEGKWKGMARPSLPSSMDSSLPGISRLVLSVSMEHKYQCQKCKEVLRKPFQAQCGHR FCVYCFKQLTSSGPIPCEACRDEGIFEEEHSILDFTVAFPDNAARREIDGLPAKCPNDSC TWSGTLKDYEGQHEGRCVFERVKCDACQALILLSEKDRHNERECEARTLNCKYCKVSFSF RDIKAHDEICQKFPMQCKECGKKKIPREKFQEHSKSCAKSKSACQFSEIGCRAVVDNGKQ QEHEQNSVMEHLRLMLPVLSAVRMRSDAAGEWQEDSGLGLYRGPEDAALAGAQVTAGGPS MQQKMAALENIVCVLNREVERTALTLEALSRQHRLDQDKIENLSNKVRQLERTLTMRDLQ LSESEQNLRELQFCTYDGVFIWKISDFSRRRQDALAGRAPAMFSPAFYSSKYGYKMCLRL YLNGDGSGRGSHLSLFFVVMRGKYDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVSST SFQRPISEMNIASGCPLFCPLAKLAGKSSYVRDDTIFIKAIVDLTGL NT seq 1584 nt NT seq  +upstreamnt  +downstreamnt atgatcagcatcgagggtaaatggaagggaatggcacgtccatctttgccctcttcgatg gactcttctttaccaggaatctctcggctggtcctgtccgtgagcatggaacataaatat cagtgccagaagtgcaaagaagttctgagaaagccttttcaggcacaatgcggacatcgc ttctgcgtgtactgttttaaacaactcaccagctctggcccgatcccttgtgaagcatgc cgcgacgaaggaatatttgaagaagaacattccatactcgacttcactgtggctttcccg gacaatgcggcacgaagagaaatcgatggtttgcctgcgaaatgcccgaacgacagctgt acctggtctggaacattaaaggattacgaggggcaacacgaaggcagatgtgtgttcgag cgtgtgaagtgtgatgcgtgtcaagccctcatcctgctcagcgaaaaagaccgacacaat gagagagagtgcgaagccagaacgcttaactgcaaatactgcaaagtctccttcagtttc agagatattaaggcccatgatgagatttgtcaaaaattcccaatgcagtgtaaagaatgt ggtaaaaagaagatccccagagaaaagtttcaggagcacagcaaatcgtgtgcgaagtcc aagtcagcttgccagttcagcgagattggctgcagagcagttgtggacaatggaaagcag caggagcatgaacagaacagcgtgatggagcatttgcgtctcatgctgcccgttctatcg gccgtgcgaatgcgctctgacgcagccggagagtggcaggaggactctgggctcggcctg taccgcggccccgaagacgccgccctcgcgggcgcccaggtcaccgcaggaggccccagc atgcagcagaagatggccgcgctcgagaacattgtgtgcgtgctgaatagagaggtggag cgaacggcactgacgctcgaagctctcagccgccaacaccgtcttgaccaggacaagatc gaaaacttatccaacaaggtgcgtcagctggagcggacattgaccatgcgggatctacag ctttccgaatcggagcagaacttgcgcgagctgcagttctgcacgtacgacggcgtgttc atttggaaaatctcggatttctcccgtcgccgacaagacgcgctggccggccgagcgccc gctatgttttcacctgcattttactccagtaaatacggctataagatgtgtttgaggctc tacctgaacggcgatggttccggcagaggcagccacctctccctgttctttgtggtgatg agaggcaaatacgacgctctcctcaagtggcccttcagccagaaggtaactctgatgctg ttggaccagaataaccgcgagcacatcatcgatgctttcagaccagacgtcagctctacg tctttccagagacccatcagcgagatgaacatcgccagcggctgcccgctcttctgtcct ctggcaaagctggcaggaaaaagctcctacgtccgagatgataccattttcattaaagcg attgtagacctcactgggctttaa

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