Silurus meridionalis (southern catfish): 124379661
Help
Entry
124379661 CDS
T08004
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X1
KO
K04355
brain-derived neurotrophic factor
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124379661 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124379661 (bdnf)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Growth factors (RTK binding)
124379661 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Cornichon
Motif
Other DBs
NCBI-GeneID:
124379661
NCBI-ProteinID:
XP_046696063
LinkDB
All DBs
Position
26:7559972..7598202
Genome browser
AA seq
324 aa
AA seq
DB search
MHSGSKSQKISAASPALIRRSSGEECLFFIIIYFICILDLYDHIPPITFCPRLTSLIRVS
SRFQQVRRVMTILFLTMVISYFSCMRAAPMREVPGVVGGHRAEGYLGAARGHGTPPSGGA
LPSLTDTFEQVIEELLEVEGEAAQGQGGGGLGNAATATAESKDIDTYASRVMISNQVPLE
PPLLFLLEEYKNYLDAANMSMRVRRHSDPARRGELSVCDSISQWVTAVDKKTAIDMSGQT
VTVLEKVPVANGQLKQYFYETKCNPLGYTKEGCRGIDKRHYNSQCRTTQSYVRALTMDSK
RKIGWRFIRIDTSCVCTLTIKRGR
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcattcaggcagcaaaagccaaaaaatatctgcagcttctccagctttaatcaggagg
tcatcaggcgaagaatgtcttttttttattattatttatttcatctgcattttagatctt
tatgatcatattccccccatcaccttttgtccgcggctcacgagcctcattcgcgtttca
tctcggttccaacaggtcagaagagtgatgaccatcctgttccttactatggttatttca
tacttcagttgcatgagagctgcgcccatgagagaggtgccgggcgttgtggggggccac
cgagccgagggctacctgggggccgcccggggccatgggactccaccgagcggaggagca
ctgccctcgctcacggacacatttgagcaggtgatcgaggagctactggaagtggagggg
gaggcagcacagggccagggaggggggggtctcggcaacgcagccacggccacggccgag
tcaaaggacatcgacacgtatgcgtcgcgtgtgatgatcagcaaccaagtgcctttagag
ccgccgctgctctttctcttggaggaatacaaaaactacctggatgccgccaacatgtcg
atgcgggtgcggcgccactcggacccggcacggcgtggcgagctcagcgtgtgcgacagt
attagccagtgggtgacggccgtggacaaaaagacggctatcgacatgtccggtcagacc
gtcaccgtgcttgagaaggtcccggtggccaacgggcagctgaagcaatacttttacgag
accaaatgcaacccgctgggttacacgaaggagggctgtcgaggaatagacaagcggcac
tataactcgcaatgccggacaacccaatcgtacgtgcgagccctcaccatggatagcaaa
cggaagatcggctggcggtttatacggatagacacttcgtgtgtatgcacattgaccatt
aagagggggagatag
DBGET
integrated database retrieval system
