KEGG   Silurus meridionalis (southern catfish): 124380029
Entry
124380029         CDS       T08004                                 
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
  KO
K08536  liver X receptor alpha
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo03320  PPAR signaling pathway
smeo04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    124380029 (nr1h3)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    124380029 (nr1h3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smeo03000]
    124380029 (nr1h3)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:smeo03310]
    124380029 (nr1h3)
Transcription factors [BR:smeo03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    124380029 (nr1h3)
Nuclear receptors [BR:smeo03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   124380029 (nr1h3)
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 124380029
NCBI-ProteinID: XP_046696658
LinkDB
Position
26:5739081..5762621
AA seq 446 aa
MMTTLSATDNADVAHGANLGCVTEEGSVSSAEVKHELHTSPSQPVLFTSSPKELHDKLHM
DPSNVKPDPSADTPAPENQPMKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGF
FRRSVIKGAQYVCKNSGRCEMDMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRLKKMKK
QHEEDAARGSAVATPSPAVDIPPLAPEQQEMIEKLVSMQKQCNKRSFIDRRKVTPWPQSQ
DPMNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLET
SRRYNPAIESITFLTPDFSYNKDDFAKAGLQIEFINPIFEFSKGMNDLHLDEAEYALLIA
INIFSADRPNVQDHDLVEKLQQPYVDALNSYIRIKRPNDHLMFPRMLMKLVSLRTLSSVH
SEQVFALRLQDKKLPPLLSEIWDVHE
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgatgaccaccctttctgcgactgataatgctgatgttgctcatggggcgaatctgggg
tgtgtcactgaggaaggctcagtgagttcagcagaagtgaaacatgagttacacacttct
cctagtcaaccagttttattcaccagttctcctaaagagctgcacgacaagctacacatg
gaccctagcaatgtcaaaccggatccctctgcagacacacctgcgccagagaaccagcca
atgaaaaggaagaaaggtccagctcctaagatgcttgggaacgaggtgtgtagcgtatgt
ggggacaaggcttccggtttccactacaacgtactgagctgtgagggctgcaagggcttc
ttcaggcgcagcgtaatcaaaggagcgcagtacgtctgcaaaaactcgggacgttgcgag
atggacatgtacatgcggcgaaagtgtcagcagtgtcgactgcgcaagtgtcgggaagcc
ggcatgctggagcagtgtgtgctttcggaggagcaaattcggttgaagaaaatgaagaag
cagcatgaggaagatgcagctcgaggctcggccgtggctacacctagcccagcggttgac
atcccccctttggctccagagcagcaggaaatgatcgagaagttagtctccatgcagaaa
cagtgcaacaaacgctcctttattgaccgccgcaaagtcactccatggccacagagtcag
gacccgatgaaccgggaggtacgtcagcagcgctttgctcatttcaccgagctggcgatc
atgtcggtgcaggagatagtggacttcgcgaaacagctgcctggtttcctggagcttacc
cgggaggaccagatcgccctgctcaaaacctccaccattgagatcatgctgctagagact
tctcgccgctacaatccagcgatcgagagcatcactttcctcacaccggacttcagctac
aacaaagacgacttcgccaaagcagggctgcagatcgagttcattaaccccatcttcgag
ttctctaagggcatgaacgacttgcacctggatgaagcagagtacgcgctgctcatcgcg
ataaacatcttttcagcagaccgacccaacgtgcaggatcatgatttggtggagaagctc
cagcagccgtatgtggacgctctgaattcgtacatcaggatcaaaagaccaaatgatcat
ctgatgttcccacgtatgctgatgaagctggtcagtctgcgtaccctgagtagcgttcac
tctgagcaggtcttcgctttgcgactgcaggacaagaaactcccccctcttctgtctgaa
atctgggatgtccacgaatga

DBGET integrated database retrieval system