Silurus meridionalis (southern catfish): 124380081
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Entry
124380081 CDS
T08004
Symbol
pdgfaa
Name
(RefSeq) platelet-derived growth factor alpha polypeptide a
KO
K04359
platelet-derived growth factor subunit A
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04020
Calcium signaling pathway
smeo04510
Focal adhesion
smeo04518
Integrin signaling
smeo04540
Gap junction
smeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124380081 (pdgfaa)
04020 Calcium signaling pathway
124380081 (pdgfaa)
09133 Signaling molecules and interaction
04518 Integrin signaling
124380081 (pdgfaa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124380081 (pdgfaa)
04540 Gap junction
124380081 (pdgfaa)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124380081 (pdgfaa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124380081 (pdgfaa)
00536 Glycosaminoglycan binding proteins [BR:
smeo00536
]
124380081 (pdgfaa)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Growth factors (RTK binding)
124380081 (pdgfaa)
Glycosaminoglycan binding proteins [BR:
smeo00536
]
Heparan sulfate / Heparin
Growth factors/receptors
124380081 (pdgfaa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
124380081
NCBI-ProteinID:
XP_046696741
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All DBs
Position
26:complement(17476364..17486259)
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AA seq
200 aa
AA seq
DB search
MRAALCCLLACCCCCFSVPHAAATAAATGEALIPRELIERLSNSEIRTMSDLQRLLELQS
AENEMVQTKRRYSKELLDHNSKRVHTRLRHKRSIEDAVPAACKTRTEVYEIPRSQVDPTA
ANFLVWPPCVEVARCSGCCNTSTMRCHASKKQHRNVKVVKIEYVRRKPKLREVQVQLEDH
LECVCVSKHHTESRLHTDVR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcgctctgctgcctcctcgcgtgctgctgctgctgcttctccgtgccgcac
gccgccgcaaccgccgccgcaaccggggaggcgttgattcctcgagagctcatcgagaga
ctgtccaacagcgagatccgcaccatgagtgacctccagcggcttctggagttacaatcg
gccgagaatgagatggttcagacgaaacgacgctacagcaaagaacttctcgaccacaac
agcaagagagtacacacacggctgagacacaagagaagcattgaggatgcagtcccggcc
gcgtgcaagactcggacagaggtgtacgagatcccacgctctcaagtggaccctacggcg
gccaactttctcgtctggccaccgtgcgttgaggtggcacggtgctcgggctgctgcaac
accagcactatgcgctgtcatgcttccaaaaaacaacaccggaatgtcaaggtggttaag
atcgagtatgtgcgtcgcaagccgaagctgcgggaggtgcaggtgcagctggaggatcat
ctggagtgtgtgtgcgtgtccaaacaccacacagagtcacgcttacacacagatgttcga
tga
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