Silurus meridionalis (southern catfish): 124380370
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Entry
124380370 CDS
T08004
Symbol
hdr
Name
(RefSeq) hematopoietic death receptor isoform X1
KO
K04722
tumor necrosis factor receptor superfamily member 10A/B
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04060
Cytokine-cytokine receptor interaction
smeo04115
p53 signaling pathway
smeo04210
Apoptosis
smeo04217
Necroptosis
smeo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124380370 (hdr)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
124380370 (hdr)
04217 Necroptosis
124380370 (hdr)
04115 p53 signaling pathway
124380370 (hdr)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124380370 (hdr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
smeo04050
]
124380370 (hdr)
04090 CD molecules [BR:
smeo04090
]
124380370 (hdr)
Cytokine receptors [BR:
smeo04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
124380370 (hdr)
CD molecules [BR:
smeo04090
]
Proteins
124380370 (hdr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
ASFV_J13L
Cadherin_C_2
Protocadherin
Pox_D5
Pox_A14
Motif
Other DBs
NCBI-GeneID:
124380370
NCBI-ProteinID:
XP_046697240
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All DBs
Position
27:16821992..16829135
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AA seq
391 aa
AA seq
DB search
MRHLSNLFVILWSLVVSSNGIRMARDVCRDDMGYSYNDICCLNCPAGTYVKEPCSRRFER
GMCEQCDFDFYTEHDNGLFKCLECTKCHSDQELVEQCSSTRNTHCQCKAGSFCPPDQPCE
ICKTCRKCKEDEEIVKSCTPLSNTICQKRGSVSATTSTNTHAVISIVSFIVIVIVIILLF
WYWRKSAGVALKGKWKMCRENGSDSVETRHNNHNDDLENGEHESCPVLTVGENMIDDEED
KGLGPSLPNTTASSQASLSVFAPQSEFCHSHSLLQQLNTLESEKVRRLVPLNGDDSLRKC
FDMFGDIDVTFHKRFFRILGVSDNSIRTVEGSHFLPEDRVYELLKVWREKEGMKADFNTL
IQALLNLDQKLSAECIIAKAIDGRHFRYEED
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagacacttgagcaacctgttcgtgatattatggagtttggtggtgagctcaaatggg
atccgaatggcgcgagacgtgtgcagggacgacatggggtactcgtacaacgacatctgc
tgccttaactgtccagctggtacttatgttaaagagccatgcagcagaagatttgagcga
ggcatgtgtgagcagtgcgactttgacttctacaccgagcatgataatgggcttttcaag
tgtttggagtgtaccaagtgtcactcagatcaagagcttgtggagcagtgcagcagtaca
agaaacactcactgtcagtgtaaagcaggttccttctgtccgccagatcaaccctgtgag
atctgcaagacgtgcaggaaatgcaaagaagatgaagagattgtgaagagctgcacaccc
ctttcgaacaccatctgtcaaaaaagaggctccgtctctgctacgacgtcgacaaatacc
cacgcagtgatctcaattgtatccttcatcgtgatcgtgatcgtgatcatcttgttattc
tggtactggagaaaatcagctggagtggcattgaaaggaaagtggaaaatgtgcagagaa
aatggcagcgattcggttgagacgaggcataataaccacaatgatgacctggagaacgga
gaacacgagtcctgccccgttctcacagtgggtgaaaacatgatagatgatgaggaggat
aaagggctcggcccaagcctccccaacactacagcttcatcccaagccagcctgtctgtg
tttgcccctcagagcgagttttgccacagccactcactgcttcagcagcttaacactctg
gaaagtgaaaaagtacgaaggcttgttcctttaaatggagatgattctctgaggaagtgc
ttcgacatgttcggagatatagacgtgacctttcacaagcgcttcttcaggatcctaggc
gtgagcgacaactccataaggacggtcgaggggtctcactttttaccagaggacagggtg
tacgagctgctgaaagtgtggagggagaaagaaggcatgaaggcagattttaacaccctc
atccaggccctgctgaatctggaccaaaagctgtcggcagagtgcatcatcgcaaaagcc
atcgatggacgccacttcagatacgaggaagactga
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