Silurus meridionalis (southern catfish): 124380951
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Entry
124380951 CDS
T08004
Name
(RefSeq) BOLA class I histocompatibility antigen, alpha chain BL3-7-like
KO
K06751
MHC class I antigen
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
smeo04145
Phagosome
smeo04218
Cellular senescence
smeo04514
Cell adhesion molecules
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124380951
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124380951
04145 Phagosome
124380951
09143 Cell growth and death
04218 Cellular senescence
124380951
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124380951
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124380951
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smeo00537
]
124380951
Exosome [BR:
smeo04147
]
Exosomal proteins
Proteins found in most exosomes
124380951
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smeo00537
]
Antigens
124380951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
C2-set_3
MHC_II_alpha
Podoplanin
C2-set_2
FAM176
DUF4668
I-set
MHC_I_2
Motif
Other DBs
NCBI-GeneID:
124380951
NCBI-ProteinID:
XP_046698252
LinkDB
All DBs
Position
27:complement(17866583..17875512)
Genome browser
AA seq
377 aa
AA seq
DB search
MENGFALLKLLLISVFSLRVSSADPHSLQYLHTGLPPGTHFPEFTAVGLFDGQQFVYYDS
NIRKMIPKTEWIQNISADDADYWDRETQKQHANQEIFIFYLDVIKQEFNQTEGVHTLQRM
YGCEIDGNSTTRGYDQYSYDGEDFFSLDLNTGSWTAVNDEVEIFIKRWDPGRSEAEYWRN
FLETECIDWIKKFVSYSRETLERKIPPAASVFQKNSSSPEVVCHATGFFPKALIIKWQKD
GEDVYEDVELRETLPNEDGSFQKRSILKVSAEELQKHTYTCVIEHSSLEKEMVLKVLKDS
GSDGGLIGIIVGVVMALVVLVIGIVFWKNKNFGKKEKKTGFKRVSSRSPSEGDSSSNKCE
SVCSCCSERKLRPAVRS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggagaatggatttgctttattgaagcttctgcttatttcagtattttctcttcgtgtc
tcctcagcagatccacactctctgcagtacctccacactggactcccaccaggaacacat
ttcccagagttcactgctgttggtctgtttgatggacagcagtttgtgtactatgacagc
aacatcaggaagatgatcccaaagacagagtggatccagaacatcagtgcagatgatgca
gattactgggacagagagactcagaagcagcatgctaatcaggaaatcttcatattttac
ctggatgtaataaagcaggagtttaatcagactgaaggagttcatactctacagaggatg
tacggctgtgagattgatggtaacagcaccactagaggatacgatcagtacagttatgat
ggagaagatttcttcagtctggatctgaacactggaagctggactgcggttaatgatgaa
gttgagatctttataaagagatgggatcctggaagatctgaggctgaatactggaggaac
ttcctggagactgagtgtatcgactggataaagaagtttgtgtcttacagcagagaaact
ctggagagaaaaattcctcctgcagcatctgtgttccagaaaaactcgtcgtctccagag
gtggtgtgtcatgctacaggtttcttccccaaagcactgattattaaatggcagaaggac
ggagaggacgtgtatgaagacgtggagctcagagagacgttacccaacgaggatggaagc
ttccagaagaggagcattctgaaagtctcagctgaggagctgcagaaacacacctacacc
tgtgtgattgagcacagcagcttggagaaggagatggtgctcaaagtactaaaagattca
ggatcagatggaggactgattggaatcatcgttggtgtggtcatggctctcgttgttctt
gttattggaattgtgttctggaaaaataaaaactttggtaaaaaggagaaaaaaacagga
tttaaacgtgtttcatccagatccccctctgaaggagattcttcctccaacaagtgtgag
agtgtgtgttcctgctgcagtgagagaaaacttcgacctgcagtcagaagttag
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integrated database retrieval system
