Silurus meridionalis (southern catfish): 124380956
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Entry
124380956 CDS
T08004
Name
(RefSeq) BOLA class I histocompatibility antigen, alpha chain BL3-7-like isoform X1
KO
K06751
MHC class I antigen
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
smeo04145
Phagosome
smeo04218
Cellular senescence
smeo04514
Cell adhesion molecules
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124380956
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124380956
04145 Phagosome
124380956
09143 Cell growth and death
04218 Cellular senescence
124380956
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124380956
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124380956
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smeo00537
]
124380956
Exosome [BR:
smeo04147
]
Exosomal proteins
Proteins found in most exosomes
124380956
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smeo00537
]
Antigens
124380956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
MHC_I_3
C2-set_2
Ig_3
C2-set_3
nec1
I-set
Motif
Other DBs
NCBI-GeneID:
124380956
NCBI-ProteinID:
XP_046698260
LinkDB
All DBs
Position
27:17887822..17891800
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AA seq
364 aa
AA seq
DB search
MVLCINESSMMKTLLILTCFLLSTLADTHTLHYFYTVVTAQLNSSISSKTQFTAVGLLDG
EQFLSYSSSSVKLSVKDWMKKTEAETYWRSEAQDMQSNQDNFNSIMSTVMTSFNHNEDVH
TLQKFYGCELHDGGVSRGYDRFGFDGEDFISLDLSAKSWTTAKPQAEILKKKWDSHRCTL
FRESYLKNECVDLLKKFTSQCRDTLERKVSPTASLFHKSSPSPGVVCHATGFFPKALNIS
WLKNGEDVYEDVELSETLPNQDGSFQKRSILKVSAEELQEHTYTCVIEHSSLEKEIVLEV
PKGPDTLQNYRVKVIDAAGNKDSVLILQMEERFGSSLVWAWLSSLLLLLLPELWSGGSRI
PSKT
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgtgcattaatgagtccagcatgatgaagacacttttaatattgacgtgtttc
ctactttccactttagcagacacacacactctacactacttctacactgtcgtcacagca
caactcaattcctccatcagctccaaaacccagttcactgccgtcggtctgctggacgga
gagcagtttctgtcctacagcagcagcagcgtgaagctcagtgtgaaggactggatgaag
aagactgaggcagaaacgtactggaggagtgaggcacaggacatgcaaagcaatcaggac
aacttcaacagcataatgagcacagtgatgaccagctttaatcataatgaagacgttcac
actctccagaaattctacggctgtgagctccacgatggcggcgtctctagaggatacgat
cggttcggttttgacggagaagatttcatcagtctggatctgagcgctaaatcctggacc
acggcgaaacctcaggctgagatcctgaaaaagaagtgggattcacaccgctgcactttg
ttccgcgaaagctacctcaagaacgagtgtgtagatctgttgaagaagttcacgtctcag
tgcagagacactctggagaggaaagtttctcccacggcttcactgttccacaaaagctcg
ccgtctccaggggtggtgtgtcatgctacaggtttcttccccaaagcactgaatatctcc
tggctgaagaacggagaggacgtgtatgaagacgtggagctcagtgagacgttacccaac
caggatggaagcttccagaagaggagcattctgaaagtctcagctgaggagctgcaggaa
cacacctacacctgtgtgattgagcacagcagcttggagaaggagattgtgctcgaagta
ccaaaaggtcctgatacactacagaattacagagtgaaagttattgatgcagcaggtaat
aaagactcggtgttgattttacagatggaggagcgttttggatcatcgctggtgtgggcg
tggctctcgtcgttattgctgctgttgttgccggaattatggtctggaggaagtagaatt
ccgagtaagacatga
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