Silurus meridionalis (southern catfish): 124380960
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Entry
124380960 CDS
T08004
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like isoform X1
KO
K06751
MHC class I antigen
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04144
Endocytosis
smeo04145
Phagosome
smeo04218
Cellular senescence
smeo04514
Cell adhesion molecules
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124380960
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124380960
04145 Phagosome
124380960
09143 Cell growth and death
04218 Cellular senescence
124380960
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124380960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124380960
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smeo00537
]
124380960
Exosome [BR:
smeo04147
]
Exosomal proteins
Proteins found in most exosomes
124380960
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
smeo00537
]
Antigens
124380960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
C2-set_3
Ig_3
Ig_2
C2-set_2
DUF7520
Motif
Other DBs
NCBI-GeneID:
124380960
NCBI-ProteinID:
XP_046698269
LinkDB
All DBs
Position
27:17939457..17943748
Genome browser
AA seq
358 aa
AA seq
DB search
MKILIFFTFSFLRTSADTHCLEYHYIALTPRHAGSEFTAVGLLDEKQFMFYSSSNKMLIP
ENWIKNSKSEIYWKNEAQNMKEYQYSFSITFKTIMDLSNHTRAHILQRIYGCKIDDDGTT
SGYNQYGYIGEDFIILDLNTGTWIAVNPQAEILKHNWESNDYATYWKNFLEHDCIDWIKT
FVTVERKVPPTVSVFQKHSSSPEVVCHATGFFPKVLNITWQKDGEDVLEEVDLRETLPNQ
DGSFQKRSILKVSAEELQKHTYTCVIEHSSLEKDLVLPVSERRILRGGGSDGGSDRGSGR
RQIAGVVAVIVVFIAVVALIVAEIVRKQGNPDSRDESDDTYFRQLLFCCCEKYMRTRR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttaattttctttacattttcttttcttcgcacatctgcagatacacactgt
ctggagtatcactacatcgccctcacgcccagacatgctggttcagagttcactgctgtg
ggtctgctggatgaaaagcagtttatgttctacagtagcagtaacaagatgctgatccca
gagaactggataaagaacagtaagagtgaaatctactggaagaatgaagcacagaacatg
aaggaatatcagtatagctttagcattacattcaaaacaataatggatctgtctaatcac
actagagctcacatactacagaggatttacggctgtaagattgatgatgatggcaccaca
agtggatacaatcagtatggttatattggagaagactttattattttggatctgaacact
ggaacctggattgcagttaatcctcaagctgagatccttaaacacaactgggagtctaat
gactatgctacatactggaagaacttcctggagcatgactgtattgattggataaaaaca
tttgtgactgtggagagaaaagttcctcctacagtgtctgtgtttcagaaacactcatca
tctccagaggtggtgtgtcatgctacaggtttcttccccaaagtactgaatattacttgg
cagaaggacggagaggacgtactagaagaggtggatctcagagagacgttacccaaccag
gatggaagcttccagaagaggagcattctgaaagtctcagctgaggagctgcagaaacac
acctacacctgtgtgattgagcacagcagcttggagaaggatttagtgctgcctgtgagc
gagagacgaatcctgagaggtggaggatcagatggaggatcagatagaggatcaggtaga
agacaaattgctggtgtagtcgcggttattgtagttttcatagctgttgtagctctcatt
gttgctgaaattgtcaggaagcagggaaaccctgattccagagatgaatcagatgataca
tatttcagacaactgttattctgctgctgtgagaaatacatgaggacaaggagatga
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