Silurus meridionalis (southern catfish): 124381130
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Entry
124381130 CDS
T08004
Symbol
gria2a
Name
(RefSeq) glutamate receptor 2a isoform X1
KO
K05198
glutamate receptor 2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04080
Neuroactive ligand-receptor interaction
smeo04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124381130 (gria2a)
04082 Neuroactive ligand signaling
124381130 (gria2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smeo04040
]
124381130 (gria2a)
Ion channels [BR:
smeo04040
]
Ligand-gated channels
Glutamate (ionotropic)
124381130 (gria2a)
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
DUF2061
Motif
Other DBs
NCBI-GeneID:
124381130
NCBI-ProteinID:
XP_046698482
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Position
28:complement(2911067..2960979)
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AA seq
896 aa
AA seq
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MMRNLSGFLFVPALWGLAFGGSPSVQIGGLFPRGADQEYSAFRVGMVQFGTAEFRLTPHI
DNLEVANSFAITNCFCSQFSRGVYAIFGFYDKKSVNTITSFCETLHVSFITPSFPADGFN
QFVLQMRPDIRGPLISLVEYYKWEKFAYLYDSDRGLSTLQAVLDTAAEKKWQVTAINVGN
LKDERKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKGYHYIIANFGF
LDGDLSKIQYGGANVSGFQIVDFDDPLVAKFDQRWEALEEKEYPGADSKIRYTSALTYDA
VQVMTEAFRFLHKQRIDISRRGNNGDCLANPAVPWAQGVEIERALKQVRVDGLTGNIQFD
QYGKRVNFSVNIMELKNSGPVKIGYWKELDKMVVTKFDLFPNDTFGMENKTVIVTTILEA
PYVMLKKNAELFTDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDADTKIWNGM
VGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAY
EIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEFEDGQLGPSESNNEFGIFNSLWFSLGAF
MQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE
IAYGTLDAGSTKEFFKRSKIALFEKMWQYMKSAEPSVFVKNTVEGVLRVRKSKGKYAYLL
ESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNAVNLAVLKLNEQGLLDKLKN
KWWYDKGECGSGGGESKEKTSALSLSNVAGVFYILVGGLGLAMLVALVEFCYKSRAEAKR
MKMTFTEAMRTKARLSVTGSIGENGRVLTPDFSKAVHAVPYMRPGMAMPLNVSELS
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggaatttgtcgggtttcctgtttgtacccgcgttatggggactcgcattcggg
ggatcaccgagcgtccaaatcgggggcctgtttccgcgcggtgcggatcaggagtacagc
gcatttcgggtcgggatggtgcagttcggcacggccgagttccgcctcactccgcacatc
gacaacctggaggtggccaacagcttcgccatcaccaactgcttttgttcgcagttttcc
cggggcgtctacgccatcttcggcttctacgataagaagtccgtgaacaccatcacatcg
ttctgcgagacgctgcacgtgtcattcatcacgccgagtttccccgctgacggcttcaac
cagtttgtgctacagatgagacccgacatccgaggccctctgatcagcctggtcgagtat
tacaagtgggagaagtttgcatatctgtacgacagtgatagaggcttgtccactttgcag
gccgtcctggacacggcggccgagaagaaatggcaggtgacggctatcaacgtgggcaac
ctgaaggacgagaggaaagacgaggcttaccgctcactctttcaggatctggagaacaaa
aaagagaggagagtgatcctggactgcgagcaagacaaggtcaaagacatcatggagcag
gtcatcacaattggtcggcatgtcaaaggatatcattacatcatcgctaattttggcttt
ttggatggagatttgtcaaagattcagtatggaggtgcaaacgtgtccggtttccagatc
gtagatttcgacgaccctctcgttgctaagttcgaccagcgctgggaggctttggaggag
aaagagtacccaggggcagacagcaaaattcgatacacttctgctttgacgtatgatgcg
gttcaggtgatgaccgaggcttttcgcttcctgcacaagcaaaggatcgacatcagtcgc
cgtggcaacaatggcgactgcctggccaatccggctgtaccgtgggctcagggggtggaa
atagaacgcgctctgaaacaggtgcgtgtggacggactgacgggaaacatccagtttgac
caatacggcaagagagtgaacttctcagtcaacatcatggagctgaaaaacagcgggccg
gtaaagattggctattggaaagagctggacaaaatggtggtcaccaaatttgaccttttc
cccaacgacaccttcgggatggagaacaagacggttatcgtgacgaccattctggaggcg
ccgtatgtgatgctaaagaagaatgcagagttgttcacggataacgagcgctatgaggga
tactgtgtggacctggcagccgagatcgcaaagcattgtgggtttaagtatcagctgaag
atcgtgggagacgggaagtacggtgctagagatgcagataccaagatctggaacggcatg
gttggcgaattggtgtacgggaaagcagacatagctgtggcgcctctgacgatcacgctg
gtccgtgaagaagtgatcgacttctccaagccgttcatgagcctgggcatctccatcatg
atcaagaagccgcagaaatccaagccaggcgtcttctccttcctggacccacttgcctac
gagatctggatgtgcatagtgtttgcctacattggtgtcagcgtcgtgctcttcctcgtt
agccgctttagcccgtacgagtggcacaccgaggagtttgaggacggccagctcggcccc
agcgagtccaataacgaatttgggatctttaatagtctgtggttttctctgggcgctttt
atgcagcagggatgcgatatttcgccaaggtcactatctgggcgtatagttggtggtgtg
tggtggttcttcactcttatcatcatctcgtcttacacggccaacctggctgcttttctc
actgtggagaggatggtgtcccccattgagagcgccgaggacctcgccaagcagacggaa
atcgcctacggaaccctcgatgctggttcgaccaaagagttctttaagagatcaaagatc
gccctgttcgagaagatgtggcagtacatgaaaagcgccgagccgtccgtgtttgtgaag
aacacggtggaaggtgtgctgcgtgtgcgcaagtccaagggcaaatacgcctacctgctg
gagtccaccatgaacgagtacatcgagcagcgcaagccgtgcgacaccatgaaggtcgga
ggaaatctcgactccaagggctacggcatcgccacacccaaaggatctgctttaagaaac
gcggtaaacctcgcggtgctaaaactgaacgagcaggggcttctggataaattgaaaaac
aaatggtggtacgacaaaggagagtgcggcagcggaggcggggagtcaaaggagaagaca
agcgctctgagcttgagcaacgtggcgggggtcttctacattctggtgggcggcctcggc
ctggccatgttggtggcgctggtggagttctgctacaagtcgcgtgccgaggccaagcgc
atgaagatgacgttcaccgaggccatgcgcactaaggccaggctgtctgtaactggcagt
attggggagaacgggagagtgctgactccagatttctctaaagccgtgcacgctgtgcca
tacatgagaccaggcatggcaatgcctcttaacgtgagcgagctgtcctga
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