Silurus meridionalis (southern catfish): 124381416
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Entry
124381416 CDS
T08004
Symbol
rela
Name
(RefSeq) transcription factor p65
KO
K04735
transcription factor p65
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04137
Mitophagy - animal
smeo04210
Apoptosis
smeo04218
Cellular senescence
smeo04620
Toll-like receptor signaling pathway
smeo04621
NOD-like receptor signaling pathway
smeo04622
RIG-I-like receptor signaling pathway
smeo04623
Cytosolic DNA-sensing pathway
smeo04625
C-type lectin receptor signaling pathway
smeo04920
Adipocytokine signaling pathway
smeo05132
Salmonella infection
smeo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124381416 (rela)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124381416 (rela)
09143 Cell growth and death
04210 Apoptosis
124381416 (rela)
04218 Cellular senescence
124381416 (rela)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
124381416 (rela)
04621 NOD-like receptor signaling pathway
124381416 (rela)
04622 RIG-I-like receptor signaling pathway
124381416 (rela)
04623 Cytosolic DNA-sensing pathway
124381416 (rela)
04625 C-type lectin receptor signaling pathway
124381416 (rela)
09152 Endocrine system
04920 Adipocytokine signaling pathway
124381416 (rela)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124381416 (rela)
09171 Infectious disease: bacterial
05132 Salmonella infection
124381416 (rela)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124381416 (rela)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
124381416 (rela)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
124381416
NCBI-ProteinID:
XP_046698981
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All DBs
Position
28:complement(8028103..8047976)
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AA seq
588 aa
AA seq
DB search
MAEMFGWGQPTMQQGTPYIEIIEQPKARGMRFRYKCEGRSAGSIPGEKSNDSTKTHPAIK
VHNFSGPIRVKISLVTKNQPYKPHPHELVGKDCKHGYYESDLPERRVHSFQNLGIQCVKK
KDVAEAVSCRLQTQNNPFNIPEAKVWEEEYDLNAVRLCFQATITLATGELYSLEPIVSQP
IYDNRAPNTAELKICRVNKNSGSCRGGDEIFLLCDKVQKEDIEVRFFRDSWESKGSFSQA
DVHRQVAIVFRTPPYCDTNLTEPVKVKMQLRRPSDREVSEAMDFQYLPADPDEYRLMEKR
KRNEGMLQNLKLDNLVTGNMSQRPYSTARRTLTASKPSAAASVPPVVNPVSCIGAAKTHL
FSSPAPGQLFQTQTKTEPAPSNGDGWKFLNNVTTAMTQSFRTVNLSDLNDFSFSTFHHPT
PDQSDTGSRRDLAGTILAQEGPTTFSINDEGEIPEFPSFSEAQTSDVENINTDEFQALLG
QSGLHGDSTSATSVCQANTAANVTIDNALGSNGSEQVGRNVTNGPWMNFPPSIVSLLQNE
PITDTEFPGTSAPSALDDMDMLTSMEEDRLMSIFDGNNQVGFMSGHPT
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaatgtttggctggggacagcccaccatgcagcaaggcacgccgtacatcgag
atcatcgagcagcccaaggcaagagggatgcgatttcgttataaatgcgaggggaggtca
gcaggcagcataccgggagaaaagagcaacgattccaccaaaacacacccagccatcaag
gttcataacttcagcggcccaatcagagtgaagatctctctggttaccaagaaccagccg
tacaagccccacccacacgagctggtcggaaaagactgtaaacacggctactatgaatct
gacctgcccgagagacgggttcacagtttccagaatctcggtattcagtgcgtgaagaaa
aaggatgtggccgaagctgtttcctgtcgcctgcagacacagaacaacccttttaacatt
cccgaagccaaagtgtgggaggaagagtacgacctgaacgctgtccgcctctgtttccag
gcaaccatcaccctggcaaccggcgagctgtattctttggagcctatcgtctctcagcct
atctacgacaacagagctccgaacaccgccgagctaaagatctgtcgcgtgaacaagaac
tccggcagctgccggggcggagatgaaatcttccttctgtgtgacaaagtgcaaaaagag
gacatcgaggtgcgcttcttccgagactcttgggaaagcaaaggttcgttctctcaggcc
gacgtccatcgacaggtcgccatcgtgttccgcacgccgccctactgcgacacgaacctg
accgagcctgtgaaagtcaagatgcagctccgcaggccatcagaccgcgaggtcagcgag
gcaatggacttccagtaccttcctgcagacccagacgagtacagactaatggagaagagg
aagcggaatgaaggaatgctccaaaacctcaaactggacaaccttgtcacaggtaacatg
tctcagaggccttacagtactgccagaagaacacttacagcttcaaaaccctcggctgct
gccagcgttccaccagtggtaaatcctgtgtcatgcattggtgcagcaaagactcatttg
ttcagttctcctgctccaggccaactgttccaaacccagactaaaaccgagccggcgccc
tctaatggagatgggtggaagtttttgaacaacgtcactacagccatgactcaatccttc
cgcaccgtcaatctttccgacctaaacgacttttccttttctacttttcatcacccgact
cctgaccaatccgacacgggcagcaggagggacttagctgggactattttggcccaggag
ggtccaaccacattcagcataaatgatgagggtgagattccagagttcccgagttttagt
gaagctcagacgtccgatgtagagaacatcaacactgacgagtttcaagcgctcttgggc
cagagcggtcttcacggagacagcacttcggctacttctgtatgtcaagccaacaccgca
gcaaacgtgaccatcgataacgcgttgggttccaacggttcggagcaggtggggagaaac
gtcaccaacggaccctggatgaatttcccaccgagcatcgtcagccttttgcagaacgag
ccgatcacagacacggagtttcccggcacatccgccccatctgccctcgacgacatggac
atgctgacctccatggaagaagaccgtctcatgtccatttttgacggcaacaaccaagtc
ggcttcatgtctggacatcccacttag
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