Silurus meridionalis (southern catfish): 124381861
Help
Entry
124381861 CDS
T08004
Symbol
tpm3
Name
(RefSeq) tropomyosin alpha-3 chain isoform X1
KO
K09290
tropomyosin 3
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04260
Cardiac muscle contraction
smeo04261
Adrenergic signaling in cardiomyocytes
smeo04814
Motor proteins
smeo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
124381861 (tpm3)
04820 Cytoskeleton in muscle cells
124381861 (tpm3)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
124381861 (tpm3)
04261 Adrenergic signaling in cardiomyocytes
124381861 (tpm3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smeo04812
]
124381861 (tpm3)
Cytoskeleton proteins [BR:
smeo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
124381861 (tpm3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
HmpF
CCDC170_1st
CLZ
CCDC39
CEP135_TSGA10_CC
Pex17
DUF3450
TMF_DNA_bd
NBP1
SlyX
DUF745
DUF7518
Lebercilin
ATG16
Motif
Other DBs
NCBI-GeneID:
124381861
NCBI-ProteinID:
XP_046699685
LinkDB
All DBs
Position
29:complement(13144..32452)
Genome browser
AA seq
337 aa
AA seq
DB search
MEAIKKKMMMLKLDKENALDQAEQAETDRKAAEERSKQHEDELIQMQKKLKSTEDELDKY
SEALKDAQEKLEIAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIVEGELERTE
ERAELAEAKKKQFEEELRVLDQTLKTLHASENKYSQKEDKYEEEIKILTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSIKAKRCQGGEHQDPRYS
GPDLERTEQFLNILDQDIPLFPFSTHSSHVSNSLQVI
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaagaagatgatgatgttgaagctggataaggagaatgctctggac
caggcagagcaggctgagaccgacaggaaagcagctgaggaaagaagcaaacagcatgaa
gatgagttgattcagatgcagaagaagctgaagtcaactgaggatgagcttgataagtat
tcagaggccctgaaggatgcacaggagaaactggagatagctgagaagaaggctgctgat
gctgaggcggaggtggcctctctaaacaggcgtatccagctggttgaggaggagctggac
agagctcaggagagactggctacagctttacaaaaactggaagaggcagagaaagcagca
gacgagagtgagagaggcatgaaagtgattgagaatagggcactgaaggatgaggagaag
atggagttacaggagatccagctgaaggaggccaagcacattgcagaggaggccgaccgc
aagtacgaggaggtggctcgtaagctggtgatcgttgagggagagctggaacgtactgag
gagagagctgagctcgcagaggctaaaaagaagcagtttgaggaggagctaagggtgctg
gaccaaacactgaagaccctgcatgcttctgagaacaagtattctcagaaggaagacaaa
tatgaggaggagatcaaaatcctgactgataagctgaaggaggctgagactcgtgctgag
tttgctgagaggtctgtagcaaagctggaaaagaccatcgatgacctggaagatgagctt
tatgctcagaaactcaagtacaaggccattagtgaagagctggatcacgccctcaacgac
atgacctctataaaagctaaaagatgccaaggaggagaacatcaagatccacgctactct
ggaccagaccttgagcgaactgaacagtttctgaacatcctggaccaggatattcctttg
ttccccttttcaacacactcatctcatgtctctaattcactccaagttatctaa
DBGET
integrated database retrieval system
