Silurus meridionalis (southern catfish): 124382988
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Entry
124382988 CDS
T08004
Symbol
gli2a
Name
(RefSeq) zinc finger protein GLI2a isoform X1
KO
K16798
zinc finger protein GLI2
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124382988 (gli2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smeo03000
]
124382988 (gli2a)
Transcription factors [BR:
smeo03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
124382988 (gli2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
HAUS6_N
Motif
Other DBs
NCBI-GeneID:
124382988
NCBI-ProteinID:
XP_046701322
LinkDB
All DBs
Position
3:complement(14249444..14302799)
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AA seq
1463 aa
AA seq
DB search
MDSTTRTAPEKKECKSSGLDASSFSDLPKKPSPTTMSRAPPLFPTFHTPIPVDMRHHEGR
YHYEPDSLHAMHGPTGLAGSPVISDISLIRLSPHAAAMGESPFNPPHPYVNPHMEPYLRS
VHNSPMLSVISAARGLSPVDVTHEQLKERGLFGLPPPPGTNPADYYHLMANHRSPYGELL
MQTGAAAAAAAVHLPDYMSPVDMSRFPSPRLTPRLSRKRALSISPLSDASIDLQTMIRTS
PNSLVAYINNSRSSSTASSSYGHLSVGAISSSLPLPSPISPSFTFPHPITHAAYQQLLSQ
HRGLSAFGHTPPLLQPSPSFINRQQPSGTVTAHSTTTSSSSSSSSNPTTEANQNAGGDSA
VSSTVNPMITKRSKVKAEVTCRISPCSQDHVELREELDKDECKQEPEAVYETNCHWEGCA
KEYDTQEQLVHHINNDHIHGEKKEFVCRWEECSREQKPFKAQYMLVVHMRRHTGEKPHKC
TFEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYV
CKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDAPTKPHPPKGSGENETNIKNAGR
ESERSTEASSTSKGVEDSLQVKSIKTENTVMYQSSPGGQSSCSSERSPLGSTTNNDSGVE
MAIHSGGSLGDLCNLDDPPVVDSTGSPGTSAGVGLQLRKNRGVVLHFDHIKKEKLKTVRD
SCSWTTSTPHVGNTKLPPIPAVGSLLESSSTGSQSIGMPGQRFGDLPFCEITVLNQLKER
RDSTTSTVSSAYTLSRRSSGISPCYSSRRSSEASQFGGRNNNLSSAGSYDPISVDLSRRS
SEASQCGGGALPSLLSLTPAQHYRLKAKYAAATGGAPPTPLPNMDRMSLRTRMALYNDSQ
ENSAHFFQARNVSTSRRCSDMSYGVPGMMPHEIPSNMPRRASDPVRRTTMDPLSLPRVQR
YNSMSSMNPSRVPPHDHHGVNLQNNTFSDGSLHCHAFSQRPPSISENVVMENMAMDAADQ
TEEDMVLPDDVVQYLRSQHAGSTQDTGMAYISGQPQVFKSNQTSQQHQQFYGQRRMALVD
ANINDIEQIMPPCQISPGSQQPFTDSDSGNKNHMPVQWNEVSSGTVDNSTRFTKQQLLRG
NLALVQQKQNTGSYQSFGSSQQSAPINQNLAVTQQGYSQRNTQRTNPIQHYRQLYFNPCQ
NLNEQTKARQGYKQEINNNLSSGNTYHGPVRNNMALQNQEAQNYKSGYLRLENQQNNMPL
PQTTLQNGSRGFQPRPPPEPKPSNRHQSSTSLPHQAGYSLSSTSSDFNTSEASPKRPAAT
THPCGGDNAVCYSGEIKMLDSNIDYNTSMSPSASQADYTTVATMASPGINQVTSTVDSSQ
TAGHTQIDFDTMLDDGDHSSLMSGTLSPGLLQSLSQNSSRLTTPRNSVTLPSVPAGISNM
AIGDMSSMLTALAEESKFLNLMA
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggattctacaaccagaactgccccagagaagaaggaatgcaagagttcaggcctggat
gctagcagcttctctgaccttcccaagaagccctcacccaccacgatgtcacgagctcct
cctctattcccgaccttccacacaccaatcccagtcgacatgcgccatcatgagggtaga
tatcattatgagccagactctcttcatgccatgcatggacccaccggattagctggaagt
ccagtgatctctgatatatctctgatccgattgtcccctcatgctgcagcaatgggcgag
tccccattcaacccaccacatccttacgtcaacccccacatggaaccctacctacgctca
gttcacaacagccccatgctgtcagtcatctcagcagcacgaggcctcagcccagtggat
gtgacacatgagcagctgaaagaacgaggtctttttggccttcctcctcctcctgggact
aacccagccgactactaccatctaatggctaatcaccgcagcccctatggagagctgctc
atgcagactggggcagcagctgccgctgccgccgtgcatcttccagactacatgagccct
gtggacatgtctcgatttccaagccccagacttacacccaggctgagccgaaagcgagca
ctgtccatctcgcctttgtcagatgccagcatcgacctgcagaccatgatacgcacctct
cccaactctctggtggcctacatcaataactcacgctccagctccactgccagtagctct
tatggccacctctcagttggagctatcagttcctctcttcccttaccatcaccgatcagc
ccctcatttacattcccccacccaatcactcatgcggcataccagcagcttctgtcccag
caccgaggtctaagtgcgtttggccacacacctcccctcctccagccatctccttccttc
atcaaccgccagcagcccagcggaactgtcacagcccacagcaccaccaccagcagcagc
agcagcagcagcagcaaccctaccacagaggccaaccagaatgcaggaggtgactcagca
gtcagcagtacggtcaatcccatgatcaccaagaggtcaaaagtgaaggcagaggtgaca
tgccgcatttccccttgttctcaggatcacgtggaactgagagaggagctggataaggat
gagtgcaagcaggagcctgaggcagtgtatgagaccaactgccactgggagggttgcgct
aaagaatatgacacacaggagcagttggtgcaccacatcaataatgatcatatccatggg
gagaaaaaggagtttgtgtgtcgttgggaggaatgttcacgagagcagaagccttttaaa
gcccagtacatgctggtcgtccacatgcggcgacacacaggagaaaagcctcataaatgc
acttttgaaggctgctctaaagcgtactctcgcctagagaacctgaaaacccatctgagg
tctcataccggggagaaaccctatgtatgtgaacatgaaggttgcaacaaggctttctct
aacgcctcagaccgagcaaagcaccagaaccgcacacattcaaatgagaaaccatatgtt
tgcaagatcccaggctgcacaaagcgttacacagaccctagctctctcagaaaacatgtg
aagacagttcatggtcctgaagcacatgtcacaaagaagcagcgtggtgatgctcctaca
aaaccccatccacctaaaggaagtggagaaaatgagaccaatattaagaatgcaggaagg
gaatctgagaggtcaactgaagccagcagcaccagcaaaggtgtggaggacagcctacaa
gtcaagtccattaagactgaaaatacagtgatgtatcagtccagccctggtggtcagtca
tcatgtagcagtgagcggtcaccacttggtagcaccaccaacaatgacagtggagtagaa
atggccatacacagtggaggcagtttgggggacttgtgtaatctggatgatcccccagtg
gtagattccacaggttctccagggacttcagcaggagtaggcctccagctgcgcaaaaac
aggggggttgttttacattttgatcatataaagaaggaaaagctgaagacagtgagagac
tcctgctcctggacaacttcaactcctcacgtcggaaacaccaagctgcctccaatacca
gctgtcggttctcttctggaaagttcaagtacaggctctcaaagtattggcatgccagga
caacgctttggagacttacccttttgtgaaattacagtattgaatcagctgaaggaacgt
agagatagtactacgagcactgtaagctcagcctacacactcagccgcagatcctcaggc
atttcaccttgttactccagccggcgctccagtgaggcctcacagttcggaggacgaaac
aacaacttaagctctgcaggctcttacgatcctatctctgtcgacctttcacgcaggtct
agtgaagccagtcagtgtggcggaggtgctttgccaagcttgcttagcctcaccccagcc
cagcattatcggttgaaagcaaaatatgcagcagccactggaggtgctccaccaacaccc
ctccccaatatggatcgtatgagtcttaggactaggatggctttgtacaatgactctcag
gagaactctgcccatttttttcaagcccgaaatgtatccacctcgagacgctgcagtgat
atgagttatggagtccctggtatgatgcctcatgaaatcccaagcaatatgccaaggaga
gctagtgaccctgttcgtcggacaactatggatcctctctccctgcctcgtgttcagcga
tacaatagtatgagcagcatgaacccttctcgtgtccctccacatgaccatcatggtgtc
aacttgcaaaataacaccttttctgatggcagtttgcattgtcatgccttcagccagagg
cccccaagcatctcagaaaatgttgtcatggaaaacatggccatggatgcagctgaccaa
acagaagaggacatggtgcttccagatgatgtagtgcaatacctcaggtcccagcatgct
ggctcaactcaggatactggtatggcctacatcagtggtcagccacaagttttcaaaagc
aaccagacctcccagcaacaccagcagttttatgggcaacgacgcatggctttggttgat
gctaatataaatgacatagagcaaataatgcccccctgccaaattagcccaggttcccag
cagccttttacagactctgatagcgggaataaaaatcacatgcctgtgcaatggaatgaa
gtcagctcaggtacagtggacaactcaacaagatttacaaagcagcagcttcttagaggc
aacttggcattggtccagcaaaagcagaacactggctcttatcaaagctttgggtcaagt
cagcagtcagcaccaatcaaccagaatttagctgttacacagcagggttactcccagagg
aacactcagaggacaaacccaattcagcactatagacagctatattttaacccctgtcag
aacctcaatgagcaaacaaaggcacgccaaggttataaacaggaaatcaacaataatctc
tcatcaggaaacacctaccatggtccagtacgcaataacatggcattgcaaaatcaagaa
gcgcagaattacaagtcaggctacttacgtctggaaaaccagcagaataatatgccactg
ccccaaacaacccttcaaaatggaagcagaggttttcagcctaggcctccgcctgaacca
aaaccttcaaacaggcatcagtcaagtacaagtttgccccatcaagctggttattctctg
tccagtacaagctctgatttcaacacctctgaggccagtccaaagaggcctgctgcaact
actcatccctgcggtggagataacgctgtatgctattcgggtgagatcaaaatgttagac
agcaacatagactataacacctcaatgtctccttctgccagtcaagctgattatactaca
gtggctacaatggcatcccctggaattaaccaggttactagcacagtggactcttctcaa
actgctggtcatactcaaatagactttgataccatgttggacgacggagatcattccagc
ctgatgtctggcactctgagccctggactcttacagagtctttcacagaattcctcacga
cttactactccacgcaactctgtgacactgccttcagtgcctgcagggatcagcaatatg
gctattggtgatatgagctctatgttaactgcccttgcagaagaaagtaaatttttaaac
ctgatggcttga
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integrated database retrieval system
