Silurus meridionalis (southern catfish): 124385000
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Entry
124385000 CDS
T08004
Symbol
phc1
Name
(RefSeq) LOW QUALITY PROTEIN: polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124385000 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smeo03036
]
124385000 (phc1)
Chromosome and associated proteins [BR:
smeo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
124385000 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
zf-FCS_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
124385000
NCBI-ProteinID:
XP_046703999
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Position
4:15838777..15852047
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AA seq
823 aa
AA seq
DB search
MEQAEDQSSSGSSSSNNTGSGGNARPAQISQMSLYERQAVQALQALQRQPNAAQYFQQLM
LQQQINSAQLHNLAAVQQATLAASRQSSSPNTSVSAVSTAQCTGNLSSTSGGGTMTNPRP
VGPATSVTSSALSQSVLLGGNSAGQGQMYLRVNRSLRAPQLIFMPGGTATAAVATVAQQQ
PQQQQQQQPQQQQQQQEVPPTSSSNQSDSDQVQNLALRCASTPRVAAIKTEYPDRKDPGL
FPIGPQSQQQQQFSPSAQQISSSKLPTPPSSTSSSLSSSSSSSSSSVPLSQLLLSPSRLT
PAATVTHILVPSSNVPTSSPGFPKPNMAAQTLVVQPLQQQQNGVDKMTGPIPIQPKTAQS
SRLPSQMPPRHPPPILPAPPTSHPPHVPVQLLGSRQGALGNSQAVAVPQARTCYTHQDSS
THNLSYTSNSVTMVTAMEPGSAGAGLKLTTQNAEPSQIGSSAVQTTDCDHSNSVAPPAGE
TGLEQTGSAQMKPAIGSLKRKSESDVAGEMTSETTAQNCQPIPDSAPPLSPAPSLDTAPE
IAFSTPPTLSLSLPHPRAPLPQAVVKPQVLTHLIEGFVIQEGAEPFPVTGPIKERAEGVP
VPLFMPLENRAPSVLKCEFCESFAPASQFRGTKRFCSKTCAKRYNVSCSHHFRSSQGRSS
ALAYDEIARHRGLHRRSSEIACAKIAGSHLHVKCRSESSRSEDVSSCEGEEEEEEEDYHS
PGSSFXCSHQSHHGPQMEESAQGSLPLDGDHFLSASPAQWSVEEVCRFISSLQGCEDLAG
HFLSQEIDGQALLLLKEEHLMSTMNIKLGPALKICASINNLRD
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggcagaggatcagagcagctctggttcctccagtagcaacaatacaggatct
gggggaaatgctcgtcctgcacagatctctcagatgtctctgtatgaacgacaagctgta
caggctctgcaggctctacagagacagcctaacgctgctcagtatttccagcagctgatg
cttcaacagcagattaatagcgctcagcttcacaaccttgctgctgtgcaacaggccact
cttgctgccagtcgacagtccagttctccaaacaccagcgtctctgcagtgagcacagca
cagtgtaccggtaatttaagcagcacttctgggggcgggaccatgacgaatcctcgacca
gtcggcccagcaacatctgtgacatcgtctgcccttagccaatcagtgttgcttggtggg
aactcagctggtcagggacagatgtacctgagagtgaaccgctctctcagggctccccag
ctcattttcatgcctggcggcacagcaacagccgctgtagcaacggttgcccagcagcaa
cctcagcagcagcagcagcaacaaccccaacagcagcaacagcaacaggaagtcccaccc
acatcttccagtaaccaatcagatagtgaccaggtacagaatcttgccctgcgctgtgct
tccaccccccgagtggctgctatcaagactgaatatcctgacaggaaggatcctggttta
ttccctattggtccacagtctcagcagcagcagcagttctctccatcagcacagcagatc
agcagcagcaaacttcccactcctccttcttccacctcttcctctctctcctcctcttca
tcttcctcctcttcctctgtccctctctctcagctcctgctttctccatcacggctcacc
cccgctgccacggtgacccacatcctggtcccgagctccaacgtccccacttcctctcca
ggttttcccaaacccaacatggcggctcagacactggtggtgcagccacttcagcagcaa
cagaatggagtggacaaaatgacgggccccatccccatccaaccaaaaacagctcaaagc
agtcgtttgccttcacagatgccccctcgccatcctcctcctattcttccagctccacct
acttcccaccccccacatgtcccggtccagttgcttggatccaggcagggtgcactagga
aactctcaggctgtagctgtgccacaggcccgaacctgctacacccaccaggatagttcc
acccacaacctcagctacacctctaattcagtcaccatggtaacggcaatggagccaggc
agtgctggtgcaggccttaaactgaccactcagaatgcagaacccagtcagattggctct
tctgcagtccaaactacagactgtgatcacagcaacagtgtggcaccacctgctggagaa
actgggttagagcaaactggaagtgcacagatgaagcctgcgatcggctccttaaagaga
aaatcagaatcagatgtggcaggtgagatgacgtcagaaaccactgcccaaaactgtcag
ccaatccctgactctgcccctccactctctcctgctccctcattggacactgcaccagaa
atagcattctccactcctccgactctgtctctgtctctgccccaccctcgagctcctctt
ccccaggctgtggtaaaaccgcaagttctcactcacctcatcgaaggctttgtcattcaa
gagggagccgagccatttcctgttactggtccaataaaagagcgggctgagggtgttcct
gtgccactcttcatgccgctggaaaaccgtgccccctctgtgctgaagtgcgagttctgt
gagagttttgctcctgctagtcagttccgtggaaccaaacgcttttgctccaaaacctgc
gctaagaggtacaatgtgagctgcagtcatcatttccgcagcagtcaaggccgcagcagt
gcactagcgtatgacgagatagcgagacacaggggtcttcaccggagaagctcagagatc
gcctgtgctaaaattgctggcagtcacctgcatgtcaagtgtcgctctgagtccagtcgt
tcggaggatgtctctagctgtgaaggtgaagaagaagaagaggaagaagactatcattct
ccagggtcctccttcntctgctctcaccagtcccatcacggccctcagatggaagagtca
gcacaaggcagccttccattagacggagaccatttcttgtctgctagccccgcccagtgg
agtgtagaagaagtgtgtcgcttcatttcctctctgcaaggttgtgaggatctggcggga
cacttcctgtcgcaggagattgatggtcaggcgctgttgttgctgaaggaggaacatctg
atgagcaccatgaacattaaactgggccccgccctcaagatctgtgcatcgattaacaac
ctgagggattga
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