Silurus meridionalis (southern catfish): 124385209
Help
Entry
124385209 CDS
T08004
Symbol
cd4-1
Name
(RefSeq) CD4-1 molecule
KO
K06454
T-cell surface glycoprotein CD4
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo03250
Viral life cycle - HIV-1
smeo03260
Virion - Human immunodeficiency virus
smeo04060
Cytokine-cytokine receptor interaction
smeo04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124385209 (cd4-1)
03260 Virion - Human immunodeficiency virus
124385209 (cd4-1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124385209 (cd4-1)
04514 Cell adhesion molecules
124385209 (cd4-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
smeo04090
]
124385209 (cd4-1)
CD molecules [BR:
smeo04090
]
Proteins
124385209 (cd4-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
Ig_2
V-set
I-set
Sp38
V-set_CD47
KIAA1549
Protocadherin
DUF485
EphA2_TM
TM_ErbB1
DUF3290
Orf78
LapA_dom
TMEM154
Motif
Other DBs
NCBI-GeneID:
124385209
NCBI-ProteinID:
XP_046704340
LinkDB
All DBs
Position
4:complement(12866669..12887935)
Genome browser
AA seq
477 aa
AA seq
DB search
MFLELLLLLLASSHSSSSAAAQPQVILAQIGNPVTLPRTKWGKDENVHVHWSFNGISLIR
RNPTNPSIRAENTEWQGRISLSSDFSLIISHVNASDFGTFQCLQHELVNEHATTYKLYDV
SIHAQEPLLVNAALTLSCEIDQGAFVLVRPSVQWIGPDNKIYTGQQSMNKNTLTVKTVSA
KHSGKWTCELKYNGGFTLKAMTDVTIVDLAPSTSDPIYTHDSAYNLNIPCSFSSKMTWST
LNKVGVTEGSWSFSPLNRSESPRTLLDLNLTPSAAWKSHDGTQSLLMESEVKDTVLDVKI
SKVSVNNRGTYTCNLKFGSQTISRNVQVEVLQVISSAGKVIYAGYPLNLTCTLGHPMSSD
LEVNWITPHSSSRQNLNNPYPMQLSIPAVGLKDRGRWICELKKNSTVLTSATFTLKVENA
PVNIWMIIAIVVGVLVLILIIVITVIYVRRCREVKYRRRKRKYCCCKNPQLKGFYKT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgttcttggaattattattacttctgctggcttcatctcactcatcttcatctgcagca
gcacaaccgcaggtgattttagcacagataggtaaccctgttactcttcccaggacgaaa
tgggggaaagacgaaaacgttcacgtccactggtccttcaatggtatttcattgattcgt
aggaaccctacaaatccttctatcagagcagagaatactgagtggcaagggcgaatctct
ctttcatcagacttttctcttatcatttcacatgttaatgctagtgactttgggaccttc
caatgtttacagcatgaacttgtaaatgagcatgcaaccacatacaaactttatgatgta
agtatacacgcacaggaaccactgttagtcaatgccgctctcacactgtcctgtgaaatt
gatcaaggagcatttgtgcttgttcgcccaagtgtacaatggattgggcctgataataag
atttatactggacaacaatccatgaacaaaaacactctgacagtgaaaacagtttccgcc
aaacacagtggaaaatggacttgtgaactgaaatataatggtggctttacactgaaagcc
atgactgatgtcaccattgtagatcttgcaccctctacatcggatcccatttacacacat
gactccgcctataatttaaatatcccttgttccttttcctcaaaaatgacctggtccaca
ctgaataaagtaggtgtgacagaaggcagttggagcttcagtccactgaaccgctctgaa
tcccctcgcactctccttgatttaaacttaactccctccgctgcctggaagtcccacgat
ggcacacaaagtttactcatggagtcagaggtaaaagatactgtacttgatgtgaagatt
tccaaggtgtctgtaaataacagggggacctacacctgcaatctgaagtttggatcacaa
acaatcagcaggaatgtgcaagtagaagtgctgcaagttatttcttcagcaggtaaagtt
atatatgcaggctatccactaaacttgacctgcactctgggtcaccccatgagctctgac
ctggaagtgaactggattaccccccatagctcatctcggcaaaatctcaataatccttat
ccaatgcagctgtcaattcctgcagtaggactgaaagacagagggcgatggatatgcgaa
ctcaaaaagaattccacagtgcttacttctgctacattcactttgaaagttgagaacgct
ccagtgaatatttggatgattatagcaattgttgttggtgttctggttttaatcctgatc
atcgtaataactgtcatctatgtccggaggtgcagagaggtgaagtatagacggcgtaag
aggaaatactgctgctgtaagaatcctcagctcaaaggtttctacaaaacctga
DBGET
integrated database retrieval system
