Silurus meridionalis (southern catfish): 124385668
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Entry
124385668 CDS
T08004
Symbol
irg1l
Name
(RefSeq) immunoresponsive gene 1, like
KO
K17724
aconitate decarboxylase [EC:
4.1.1.6
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo00660
C5-Branched dibasic acid metabolism
smeo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
124385668 (irg1l)
Enzymes [BR:
smeo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.6 cis-aconitate decarboxylase
124385668 (irg1l)
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Motif
Pfam:
MmgE_PrpD_N
MmgE_PrpD_C
Motif
Other DBs
NCBI-GeneID:
124385668
NCBI-ProteinID:
XP_046704816
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All DBs
Position
5:7777208..7781204
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AA seq
498 aa
AA seq
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MLSTIQKATRQVSALSAIRSFHKSALDVMERPAPEETVTSSFGRFIQGVQPRHLSAVVLH
RSKRMVLDSIGVGLLGSTTEVFELALQHCQHMYAPDDISFVYGRSGTKLSPTLAALVNGV
AVHSMDFDDTWHPATHPSGAVLPPLLAICDMLPQNSKPSGFDLLMAFNIGIEVQGRLMRF
SNEAHNIPKRFHPPSVVGTLGSAAACARLLSLNQTQCSHALAIAASLAGAPMANAATQSK
PLHIGNASRLGLEAALLASRGMEASPLVLDGVPGVAGFSAFYEDYTPKPMVSPDDAEHTF
LLETQDIAFKRFPAHLGMHWVSDAAAHVHKALLALSGGIISPSSVQEILLRVPHSKYINR
PFPESEHQARHSFQFNACTTLLDGQVTVQSFHPKALMRPELHALLSRVRVEHPQDNPANF
DCMYGEVQVTLVDGIVLQGHCDTFYGHWRNPLSKESLHKKFCNNASVVLPPERVNGIIEA
VEKLEFLSDCKPLLDQLQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgctttccacaattcagaaagcaaccagacaagtgtcagccctgtctgcaattagaagt
ttccataaatctgcactagatgtcatggagcgccccgcccctgaggagactgtaacaagt
agctttggccgatttattcagggtgtgcagccaaggcatctctcagcagtcgtactccat
agaagcaaacgtatggtgctggacagcattggtgtagggctgctgggtagcaccactgaa
gtgtttgaactggcactccagcactgccagcacatgtatgctcccgatgacatcagcttt
gtctatgggcgcagtgggaccaaactttccccaaccctggctgcattagtcaatggagta
gcagttcattccatggactttgacgatacctggcaccctgcaactcatccatctggggca
gtgcttcctcctctccttgccatttgtgacatgttgcctcaaaacagcaagccaagtggt
ttcgacctcctgatggcattcaacattggaattgaggtccagggtcgccttatgagattc
tccaatgaggctcacaacattcccaagaggttccacccccctagtgtcgtgggtacactg
ggcagtgctgctgcatgtgcccggcttctttccctcaaccagactcagtgcagccatgct
ttggccattgctgcatctttagcaggtgccccaatggccaatgctgccactcagtcaaag
ccactacacattggcaatgcatctcgtctgggccttgaagctgccctactagcctctcgt
gggatggaagcaagtccactggttttggacggagtgcctggggtagctggcttcagtgct
ttttatgaagattacaccccaaaaccaatggtgtcccctgatgatgcagagcacacattt
cttctagagacacaagacattgctttcaaacggttccctgcccacttgggcatgcactgg
gtttctgatgctgctgctcatgtccacaaagccttgttggctctttcgggaggaatcatc
tccccaagctcagtgcaggaaatcctgctacgggtgccacactctaaatatataaatcgc
ccctttccagagtcagagcaccaggcacgacactcctttcagtttaatgcttgcaccaca
ctgctggatgggcaggtaacggtgcaatcctttcatcctaaagcactcatgaggccagag
cttcatgccttgctctcccgtgttcgagtagagcacccccaagacaatccagctaacttt
gattgcatgtatggtgaggtgcaggtcactttggtagatggtattgtgttgcaaggccat
tgtgacactttttatggccactggagaaatccactaagtaaagagagcctgcacaaaaag
ttttgcaacaacgcaagtgtagtgctcccacctgagagggtcaatgggatcatagaagct
gtggagaagttggagtttctttctgactgcaaaccactgctagatcagttgcagtaa
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