Silurus meridionalis (southern catfish): 124385709
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Entry
124385709 CDS
T08004
Name
(RefSeq) RING finger protein 148
KO
K10629
E3 ubiquitin-protein ligase RNF128 [EC:
2.3.2.27
]
Organism
smeo
Silurus meridionalis (southern catfish)
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smeo04121
]
124385709
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124385709
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124385709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
SieB
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
124385709
NCBI-ProteinID:
XP_046704892
LinkDB
All DBs
Position
5:11390663..11397466
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AA seq
379 aa
AA seq
DB search
MKSDYRRIHGLTWTWLALWVFQSRTYSVSSMIFWTAYVEVFYMNQETNQTMSSMCECGVY
GSKSPLKQAAGLVGLPISDSLACQPNTTFNKKDEPWIALIKRGNCTYSKKIQAARRAGAS
AAVIYNVDGPGNGTNTMSHAETEGIVAIMIGHNLGRDIIDLIESGTDVYMNIEVANRHGP
WNPFWIYIMSFIFFGITAIILGYFIFVVLSRFYQNRQLRIHQKKLKKVAEKAVAKLEVRT
LRRTDPEVEAEESSCVVCLDAFMRCDVVTTLPCSHIFHKTCIEPWLLEHHTCPMCKYDIL
IGEPGQESPIPPADVRFYPSSVSGLLINSPGVVTSTEQQGFQTTEFAAEEQNSSRMDHSY
MNPAFEEEHQITDIYSHQV
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtgactataggagaatacatgggttaacttggacatggctggcattatgggtt
tttcagtctcggacctattcagtttcttcaatgatattttggaccgcatatgttgaggtg
ttctacatgaaccaagaaactaatcaaacgatgagcagtatgtgtgagtgcggagtgtat
ggatcaaaatcacctttgaaacaggccgctggattagtggggcttccaatttcagattca
ctggcctgccagccgaataccacattcaacaaaaaagacgagccatggatagctctcatc
aaaagaggcaactgtacctattcaaagaaaattcaagccgctagacgagcgggagcatcg
gccgcagtcatttacaatgtagatgggcctggaaatgggacaaacacaatgtctcacgca
gaaacggaaggcatagtagcaattatgattggacataatctgggcagagacattatagac
ctgattgagagtgggactgatgtctatatgaacatagaagtggctaaccgacatggtccc
tggaaccctttttggatttacatcatgtctttcatcttctttggtataacagctattatt
ctgggctacttcatctttgtagtccttagccggttctaccaaaaccgacagcttcggatc
caccagaaaaagcttaaaaaagtggcagagaaagctgttgccaaattagaagttcggact
cttcggcgaactgatccggaagttgaagcagaagagagcagctgtgttgtttgcttggat
gcctttatgaggtgtgatgtcgtgacaactctgccttgcagccatattttccacaaaacg
tgcattgagccatggttactggaacatcacacctgtccaatgtgtaaatatgacattctt
ataggagagcctggccaggaatcccctataccaccagcagatgtcagattttatccaagt
tctgtgtcaggtttactgatcaactccccaggggtggtcacgtctacagagcaacaagga
ttccagactactgaatttgctgctgaagagcaaaacagcagccgaatggatcacagctat
atgaacccagcatttgaagaggaacaccagatcactgacatttattcgcatcaagtttaa
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