Silurus meridionalis (southern catfish): 124385940
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Entry
124385940 CDS
T08004
Symbol
kdrl
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04020
Calcium signaling pathway
smeo04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124385940 (kdrl)
04020 Calcium signaling pathway
124385940 (kdrl)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124385940 (kdrl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
smeo01001
]
124385940 (kdrl)
Enzymes [BR:
smeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
124385940 (kdrl)
Protein kinases [BR:
smeo01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
124385940 (kdrl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Ig_2
ig
Pkinase
Ig_VEGFR-1-like_5th
V-set
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
VEGFR-2_TMD
C1-set
C2-set_2
C2-set
Haspin_kinase
DUF3919
Motif
Other DBs
NCBI-GeneID:
124385940
NCBI-ProteinID:
XP_046705406
LinkDB
All DBs
Position
5:14664997..14707587
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AA seq
1665 aa
AA seq
DB search
MTPKERAAFIVLLFHCLMPAKGMVLEPQLHPPKDIHLQHAGGSLILICRGSTQVHWRLAN
RNLRSEGVHIEPCELTTNCSKLVMHNLKYTDTGYYTCSHTNSRELQSSTYVFVSDHHHPF
LETSREKIIYIYKHEKLLDIPCRTTSPGLNVTLKTMSSMKDSVKARISWDPKVGFKIPLG
PFKNNTKFTCATSVNGKQVETSFILLYLMSNVPENVQITPEHPRVMVGDTLVLTCSDNTT
YDGRIKFDWQFQNSHISRTHNTYLRRSGSNKLVVMSSELIIPNVTMEDNGIYACRATVNG
LKKLASVEVTVLEHQSLSMTHGTHEDVSGEEVAPDRELWYKADFSTHSPLCYEEMDHDFI
IKDMKEKNAGVFTLAFTNQKNGFHKNISCRIFAKGMVLEPQLHPPRDTHLQHAGGSLILI
CRGSTQVQWMLASRNLSSEGVHIKPCELTANCSKLVIHNLKYTDTGYYTCSHTNSREHES
STYVFVKDYYHPFLETFSEKFLFAFRNDKTLEIPCRTTSPSQNVTLETIPPMKNSLKARI
SWDPKVGFRIPLRPYKNYNMIICATHVDGRLFKSNFIMLRRTNFLNNAHIAPKHPRVVAG
NTLILTCSADTTFNGRIDFNWKFEHKPINRTHYIHRTRSNPNTTIVMNSEIVIPNVTLKD
KGNYICTAKIGESMKNASVTVIVHEHPFLNVTHGTHKVVTVEKGKRWDFKPQVNALPAPD
NVVWYKDGFPINTTLCYELKGYNLTIKEVKEKDAGVFTVALSNQESGLHRNISYTLLVNM
KPRISEEEMAVGSQTYRLGQEHHLTCTVYGFPKPNITWLWQPCDPGHELTKCKLYKNPIP
VKDSNRFSYPGNLIKDLSNKPMEINGRNKTISTLVVEAKVSGLYICKASNKYGERTMTTH
FYVNDQLPSFEVIPLTASEGDDVTLMCRGTRFLYDSLKWFDSQNRLVQSDRSIEISPYSV
SLSLRLINVSRNHTNDYICKAVNINTKKEVNTTSKLIIYERRVPLLIQNLTSQEVNSSST
LTLACLAHGVPPPLITWYKDKIPITEGPGITLNDSGVLIIQRVKKEDEGMYECQASNAEG
VAASSAVITVSGDEGKPNIEVIILVCTGAAATFLWIMLILFIRKLRKPSSADLKTGYLSI
IMDPEQMPLNEQWDHLPYDSSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLSTCKT
VAVKMLKGGATNSECRALMSELKILIHIGHHLNVVNLLGACTKQGGPLMIIVEYCKYGNL
SNYLRSKRGDFVVYKSQDGKALLPSSGCELSELLKRRLESVASTGSSASSGFIEDKSYCD
SEEEEEETEDMYKRVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKI
CDFGLARDVYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFGVLMWEIFSLGAS
PYPGVQIDEEFCCRLKEGTRMRPPEYASSEIYQTMLDCWHGEPEQRPTFTELVERLGDLL
QASVQQEGKHYIPINTALLTKADPSNVDPAEDMSLRPVSLRDSGSSWNIKIRPGSIKTFD
EVTIESGTNDMHEGEHSDSGMGLSSDDLKKLKHLESLVQPLTIMALAMKTKSKESVLSEG
ENEKYPPPIPSLDFSLEDNSLDPELECHSPPPDYNYVVRYSTPPV
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgactccgaaagaaagagcggctttcatagtcctgctttttcactgcttgatgccagcg
aaagggatggtgttagagccacagctgcatcctccgaaagacatacacctgcagcatgct
ggaggctcccttatactcatttgcagagggtcgacccaagtgcattggcggcttgccaat
aggaatctaagatctgaaggggtccacattgaaccatgcgagctaactacaaactgcagc
aagttagtgatgcacaacctgaagtacactgacacaggatactacacttgtagtcacacc
aattccagagaacttcagagttccacatacgtctttgtcagtgatcatcatcatccattc
ctggagacttcgagggaaaaaatcatttatatatacaagcatgaaaaacttctggacatc
ccttgcaggacaacatctcctggtctaaatgttactttgaaaacaatgtcctctatgaag
gactctgtcaaagctcgtatatcgtgggatccaaaagtgggttttaagattccactgggt
ccttttaagaacaacaccaagttcacatgtgctaccagtgtgaatggcaaacaagtggaa
acaagcttcatcttactatatcttatgagcaatgttccggaaaatgtgcaaatcacccct
gagcatccaagagttatggttggagacactttggtcctcacctgttcagacaacaccacc
tacgatggcaggattaaatttgactggcagttccaaaacagccatatcagtaggactcac
aacacttatttgagaaggagtgggtctaacaagctcgttgtaatgagcagtgaacttatt
atacccaatgtgaccatggaagacaatggcatttacgcttgcagagcaacagtgaatggc
ttgaagaagcttgcttcagtcgaggtcactgtacttgagcatcagtctctcagtatgact
catggaacacatgaagatgtcagcggtgaagaagtggcaccagacagagagttgtggtac
aaggctgacttctccacccattcccctttatgctatgaggaaatggatcatgactttatc
ataaaggatatgaaagaaaaaaatgctggagtctttactttagcttttaccaatcagaag
aatgggtttcacaagaacataagctgcagaatttttgccaaaggaatggtattagagcca
cagctgcatcctcccagagacacgcacctgcagcatgccggaggttcccttatactcatc
tgcagggggtctacccaagtgcagtggatgcttgcaagtagaaatctaagctcagaaggg
gtccacattaaaccgtgtgagctaactgcaaactgcagcaagctagtgatacacaacctg
aagtacactgatacaggatactatacctgcagtcacaccaattccagagaacatgagagt
tccacatatgtatttgtcaaagattattatcatccatttctggagacgttcagtgaaaag
ttcctgtttgcattcaggaatgacaaaactctggagattccttgcaggacaacatctcct
agtcaaaatgttactttggaaacaattcccccaatgaaaaactcccttaaagcacgcata
tcatgggatccaaaagtgggtttcaggattccactgcgtccttataagaactacaacatg
atcatatgtgccacacatgtggatggaagactgttcaaatcaaacttcatcatgttgcgt
cgtaccaattttctgaataatgcacacattgctcccaagcatccaagagttgtagctgga
aacacactgatccttacctgctcagcagataccacattcaatggcagaattgattttaat
tggaaattcgaacacaaacctatcaatcggactcactacatacacaggacaaggagtaac
cctaacaccaccattgtaatgaacagtgaaatagttatacccaatgttactctaaaggac
aaaggcaattatatttgcactgcaaaaattggtgaatctatgaaaaatgcttcagtcacg
gtcattgtacatgagcatccattcctcaatgtgacccatggaacacataaggttgttact
gttgaaaaaggtaaaagatgggactttaaaccacaggtcaatgctctaccagcaccagac
aatgtagtgtggtacaaggatggcttccccatcaacacaaccttatgctatgaattaaaa
ggctataatctcacaattaaggaggtgaaagagaaggatgcaggggtctttaccgttgct
ttatccaaccaggagagtggactccacaggaacatcagctacacacttctggtcaatatg
aaacccagaatatctgaggaagagatggctgtaggctctcagacttacagactaggccag
gagcaccatcttacctgtactgtctatggattcccaaagccaaatattacatggttgtgg
cagccttgtgaccctggtcacgagctcacaaagtgcaaactgtataaaaatccaatacct
gtcaaggacagtaacagattttcatatccgggtaatttaattaaggatctgtccaataag
cctatggagataaatggcagaaacaagacaataagtactctggttgtggaggctaaagta
tccggactctacatttgcaaagctagcaataagtatggagagaggacaatgacgactcat
ttctatgtgaatgatcagctcccgtcttttgaggtcatacccttgacagcctctgaagga
gatgatgtcactctgatgtgccgtggcacaaggtttctctatgatagcctgaaatggttt
gattcacagaatcgcctggttcagtctgaccgctcgatcgagatcagtccttattctgtc
tctctttcactcagactgataaatgtgtctagaaaccatacaaatgattacatatgcaaa
gcagtcaacatcaacaccaaaaaagaagtcaatacaacatctaagttaatcatttatgag
agaagagtacccttgttgatacagaacttgacaagtcaggaagtgaacagtagcagcact
ctgaccctggcatgtctggcccatggtgtgccacctccattaattacatggtacaaggac
aaaattcccatcacagaaggaccaggaattactctgaatgacagtggggtcttgatcata
cagagggtgaagaaagaggatgagggcatgtatgagtgtcaggccagtaatgctgaaggt
gtggcagcctctagtgcggtcataactgtatcgggtgatgaaggcaagccgaatattgag
gtgatcatccttgtgtgcacgggagctgcagccacctttctttggatcatgctcattctc
ttcatccgcaaactaagaaagccaagttcagcagatctgaagacaggctacctgtccatc
atcatggatcctgaacagatgcctcttaatgaacagtgggatcatttaccctatgacagc
agcaaatgggagttccctagagaccgtcttcgactgggtaaaacactgggccatggtgcg
tttggaaaagttgtagaggcctctgcatttggcatagacaagctctccacgtgtaaaacc
gttgctgttaaaatgctgaaaggaggagctacaaacagtgaatgcagagctcttatgtct
gaactgaagatacttattcatattggccaccatctcaatgttgtcaatctactgggagcc
tgcactaagcaaggaggcccattgatgattattgtggagtactgcaagtatggcaacctt
tctaattacttgcggagcaagaggggagactttgtggtttataaatctcaggatggcaaa
gcactactgcctagttcagggtgtgaactaagtgaactcctgaagcggcgactggagagt
gtggctagcacgggaagctcagccagttcaggctttattgaagataagagctactgcgac
tcagaagaagaagaggaagagactgaagacatgtataagagagtgttgacactagaggac
ttaatttgctacagctttcaagtagccaaaggcatggagtttttggcttcacgaaaatgt
attcaccgtgatttggcagcccggaacatccttttgtctgaaaacaacgttgttaagata
tgtgattttggactagccagagacgtgtataaagacccagactacgttcgtaaaggagat
gccagacttcctcttaagtggatggcaccagaagccatatttgacaagatctatactaca
cagagtgatgtttggtcctttggagtgctaatgtgggagatcttctctctgggagcctct
ccttatcctggtgtacaaattgatgaggaattctgttgccgtttgaaagaaggaaccaga
atgcgaccacctgagtatgcttcctctgaaatatatcagaccatgctggattgctggcat
ggtgaaccagagcagaggcccacttttacagagctagtggaaagacttggagacctactt
caagcgagtgtgcagcaggaggggaaacattacattcctatcaacacagcactactgaca
aaagcagatccgtcaaacgtagaccctgcagaggacatgtctcttagacctgtctctctc
agagactcaggaagctcatggaacatcaagattcgtccaggcagcatcaaaacctttgat
gaagtaacaatagagagtggaacaaatgatatgcatgagggagagcattcagacagtggc
atgggtctgtcttctgatgatctgaagaagctgaagcatttggaatccttggttcaaccc
ttaactatcatggctctggcgatgaagacaaagagtaaagagtctgttttgtcagagggg
gagaatgagaaatacccaccacccatcccttcactagacttcagtctggaagataactca
ctggatccagagctggaatgtcatagccctccaccagactacaattatgttgtccgctat
tccacaccacctgtctga
DBGET
integrated database retrieval system
