Silurus meridionalis (southern catfish): 124386087
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Entry
124386087 CDS
T08004
Symbol
cd40lg
Name
(RefSeq) CD40 ligand
KO
K03161
tumor necrosis factor ligand superfamily member 5
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04060
Cytokine-cytokine receptor interaction
smeo04514
Cell adhesion molecules
smeo04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124386087 (cd40lg)
04514 Cell adhesion molecules
124386087 (cd40lg)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
124386087 (cd40lg)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124386087 (cd40lg)
04090 CD molecules [BR:
smeo04090
]
124386087 (cd40lg)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Tumor necrosis fators
124386087 (cd40lg)
CD molecules [BR:
smeo04090
]
Proteins
124386087 (cd40lg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Muted
SUKH_5
Motif
Other DBs
NCBI-GeneID:
124386087
NCBI-ProteinID:
XP_046705671
LinkDB
All DBs
Position
5:complement(15414988..15417493)
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AA seq
262 aa
AA seq
DB search
MSTMINTFHSSYNPSPGPPPIPPRSSHRGGPVVPSNTPLVKFLSVLLLLLIIQTFGGFVY
LFHRINTLQDRRNENEISTLRQLQQCAENNLESEEVQFCSKLVENFKTVLKKVSQAEGRV
AFLTGSGAQARMVLNDKINSNTLVWDTTHSVVDKISLSTSGVLTIYYSGYYLIQSQVTFS
SADEKAVLKQSLLTQRPNEKGPTELLQSYCSLPRKTIIPDMCTASQAGVFKLEKDQRLYI
TVNNRSLVHHDSTTFGLFRLQY
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtccactatgataaacacttttcacagcagctacaatccttcaccaggtcctccaccg
atacctccacggtcaagccacagaggaggaccagtggtgccatcaaacacaccattagtc
aagtttttgtcggtgctgcttcttctgctaataatacagacatttggaggatttgtctac
ctgtttcatcggattaacacgctgcaggacagacgcaatgagaatgagataagcacacta
agacaactacagcagtgtgctgaaaacaacttagaatctgaggaggtacagttctgcagt
aagctcgttgaaaacttcaagactgttcttaaaaaggtctctcaggctgaaggaagagtg
gctttcttgactggatctggagctcaagcaaggatggtgttaaacgataagatcaattcc
aatacactggtgtgggacacaacccactctgtggtggataaaatcagcctcagcacatca
ggagtcctgaccatttactactctggatattacttgatccaatctcaagtcacattttcc
agtgccgatgaaaaagcagtgctcaagcaatccttattaactcaaaggccaaacgaaaag
ggcccaactgaactgctccagtcatactgcagcttgcctcggaagactatcatacccgat
atgtgtactgcctcgcaggcaggggttttcaaacttgagaaggatcagagactgtatatt
actgtaaataaccggagcttggtgcaccatgactctaccacttttggattgttcaggcta
caatactga
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