Silurus meridionalis (southern catfish): 124386114
Help
Entry
124386114 CDS
T08004
Symbol
egf
Name
(RefSeq) pro-epidermal growth factor
KO
K04357
epidermal growth factor
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04010
MAPK signaling pathway
smeo04012
ErbB signaling pathway
smeo04020
Calcium signaling pathway
smeo04068
FoxO signaling pathway
smeo04510
Focal adhesion
smeo04540
Gap junction
smeo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124386114 (egf)
04012 ErbB signaling pathway
124386114 (egf)
04068 FoxO signaling pathway
124386114 (egf)
04020 Calcium signaling pathway
124386114 (egf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124386114 (egf)
04540 Gap junction
124386114 (egf)
09142 Cell motility
04810 Regulation of actin cytoskeleton
124386114 (egf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124386114 (egf)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Growth factors (RTK binding)
124386114 (egf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
cEGF
DUF5050
Vgb_lyase
EGF_3
EGF
SGL
EGF_CA
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
124386114
NCBI-ProteinID:
XP_046705720
LinkDB
All DBs
Position
5:complement(1022005..1040353)
Genome browser
AA seq
1087 aa
AA seq
DB search
MVLGRLTVILNLILWVKNIHTDTSTSCRTAGNWSCTDPRPYLLVGLKNFILQMDLDRTSP
KRLASGLGNDILMDFHYREGRVYWVDTHTGVLSRIQLDGTHTKKLLSLGKGISGLAVDWR
GNSVYWSSRKTGTIQRADVDGHEVKTILRDLSRPSDIVIDPNARFVFWLSDGVMSGIQRL
DLIGDLIFTLLEIPDRLLCLAVDVVEKKLFWIQDGGSELSSLGSCDYNGNLVNVINQRLR
TKSPKMSLFSDYVYLTDSESQSVLRVNRHTGEPAEMLKMRSVPVDVKVIHPMNQLVEESR
AAFTPVCKTDECVKVCSSPGGHCKCNSGFRLSELEDSCEDINECALWNHGCSLGCENVPG
SYFCTCPEGYILLPDHKTCIEMQPCVENGTLCEHACTHTVEGDVCVCPVGSSLKPDGRAC
TGCVSVDRGGCSQVCVTLSPGRWECECQPGYQLQPDGKQCKALGPPAWMLFANMVDVRKV
KVDGSESTSLINETKRFITAVDYDPVQNRVYFADTERRQIESVSVDGGKTEVLIDDLVSP
EGIAVDWINRNIYWTDRGQSSVSCSRLDGSNNTLLIHDKLLQPRDVTVHPQAQMIFWTDV
GVPVAVWRAGLDGSDRTVLISSGLVSPCGISVDHSTHTLYWSDITTGHIESAGLDGSHRH
TLTNQQVGHPFDVAVFEDTLWFTNWKDNHIYRLDKRTGSDVERLDVDSVKPASLVIVHHL
IKPGADLCLHGNGGCSHVCESRLGLVHCSCQSQHVLSTNGKTCLHVDASSLSSSTSSSST
SAGSGDPKWSDQMKNKSPNYESFPSSPLSSERERISEKMVSDQDECFYLNCSENAQCVLE
EGGSVCRCLSGFTGDGHRCMLEHSSALSRPSSGTPLDMTTSWQRGDVVVCPSTHDSYCLH
DAVCFYFPEMETYACNCAPGYMGERCQYSDLKWWDLQQAEHEKRRNTAIAVCITLLLLLL
SITATITYCYRYYRCRRCSETRVPVDVVSEACVCEKSVTETPSISPQFYIVLDYRVCNNE
KIPPVVESQKRGVCPCCCSETDDSVVSEDSMTQKTLVDFAVSDTPASCTKPSVDLISLDS
SHTPSLI
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggttttggggagattaacagtcattttgaacctgattctctgggtgaagaacatccac
accgatacgtccacatcatgcaggacggcaggaaactggagctgtacggatcccaggccg
tatctgctcgttggtctcaagaacttcattctccagatggacctggacagaaccagtcca
aaaaggcttgcatctggcttgggaaacgacattctgatggactttcactacagggaagga
agagtgtattgggtcgacacacacacgggtgtcctgagtcggatccagctggacggaaca
cacactaagaaacttctatcactggggaaaggaatctcaggcctggctgttgactggaga
ggaaactctgtgtactggagcagcaggaaaacagggacgatccagagagcagatgtggat
ggacacgaggtgaaaaccatcctgagagacctgagtcgaccaagtgacatcgtgatcgac
ccaaacgcacggtttgtgttctggttatcggacggcgtgatgtctggtatccagcgcttg
gatctgataggagatctgatcttcacactgctggaaatcccagacaggttgttatgtttg
gctgtggatgttgtggagaagaagctgttctggattcaggatggtgggagtgaactcagc
tctctcggctcctgcgattataatggcaacctcgttaacgtcatcaaccagagattacgg
acgaagtctccgaagatgtcgcttttctctgattatgtgtacctgacggactccgagtca
cagagtgtattgagagttaacaggcacactggagaacctgctgagatgctgaagatgcgg
agcgttcctgtcgatgttaaagtgatccatccgatgaatcagctagtggaggagagccgt
gctgcgttcactccggtatgtaagacagatgagtgtgtgaaggtgtgttccagccctggt
ggtcattgtaagtgcaattccggcttcaggctcagcgaactcgaagactcgtgtgaagat
ataaacgaatgtgctctgtggaatcacggctgctcgctggggtgtgagaacgttccaggt
tcttatttctgcacctgtcctgaaggatacattctcctgcctgaccacaaaacctgtata
gaaatgcagccatgtgtggagaatggtacactgtgtgaacacgcttgcacacacacagta
gaaggcgacgtgtgtgtgtgtccagttggatcttccctcaagcctgatggacgtgcctgc
acaggttgtgtgtctgtggatcgaggtggttgtagtcaggtgtgtgtgacgttgtcgccc
gggaggtgggagtgtgagtgccagcctggataccaactacagccagatggcaaacaatgc
aaagccctaggtcctccagcgtggatgctatttgctaacatggtggatgtgaggaaagtg
aaagtcgatggatcagagagcacaagtctgattaatgaaaccaaacgcttcatcacagct
gtggattatgatcctgtccagaacagggtgtactttgctgatactgagcgtagacagatt
gagagtgtgagtgtagatggaggtaagacagaggtgctgatcgatgatctcgtctcaccc
gagggaatcgcggtggactggatcaaccgcaacatctactggacagaccgaggtcagtcc
tctgtgtcctgtagtcgattggacggttcgaacaacacactgctgattcacgacaaactt
ctgcagccaagagatgtgacagttcatcctcaagctcaaatgatattctggacagatgtg
ggtgttcccgtggcggtatggagggcggggctggatggatcggaccgcacagtgctgatc
agttctggactcgtgtctccctgcggcatcagtgtggatcacagcacacacacactgtac
tggagtgacatcacaaccggacacatcgaatcagcaggactggacggctcacaccgacac
acactcacaaaccagcaagtaggtcatccgttcgacgtggcagtgtttgaagacactctg
tggtttactaactggaaagataatcacatttatcgtctggataaaagaacaggaagtgat
gtggagcgactcgatgtggattctgttaaaccagcatcactcgttatagtgcaccatctc
attaaaccaggggcggacctttgtctccatggaaacggaggatgttcccatgtttgtgaa
agcagactcggattggttcattgctcctgtcaatcacagcatgttctttcaactaatggc
aaaacctgcctgcatgtagatgcttcatccttgtcttcatccacttcttcttcttcaacg
tctgcagggtcaggtgatccaaaatggagtgatcagatgaagaataaatccccaaactat
gagagtttcccttcatctcctttgtcctctgaacgagaacgcatcagcgagaagatggtg
tcagatcaggatgaatgtttctatctgaactgcagtgagaacgctcagtgtgtgttggag
gagggaggatctgtgtgccgctgtctgagtggcttcaccggagacggacatcgttgtatg
ctggagcacagcagcgccctctccaggccaagctcagggacgccactcgacatgacgact
tcgtggcagcgtggggacgtggtggtctgtccatctacacacgactcctactgtctccac
gacgctgtgtgtttctactttcctgagatggagacctacgcctgcaactgtgctccaggt
tatatgggagagcgatgtcagtacagtgatttaaagtggtgggatctgcagcaggctgaa
catgagaagaggagaaacaccgccatcgctgtgtgcatcactttactcctcctgctgctg
tccatcacagccaccatcacctactgctacaggtactacaggtgtaggaggtgttcagag
acacgtgtcccagtcgacgtggtcagtgaagcgtgtgtgtgtgagaaaagcgtcacggaa
acaccgtctatcagccctcagttctatatagtgctggactacagagtgtgtaacaatgaa
aagattcctccagtggtcgagtcccaaaaaagaggagtgtgtccatgctgctgttcagaa
acagatgacagtgttgtctctgaagactctatgactcagaaaactcttgtggattttgca
gtcagtgacacaccagcgtcatgtacgaagccgagtgtcgatctgatctctctggacagt
tcacacacaccatcactgatctga
DBGET
integrated database retrieval system