Silurus meridionalis (southern catfish): 124386282
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Entry
124386282 CDS
T08004
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04137
Mitophagy - animal
smeo04140
Autophagy - animal
smeo04217
Necroptosis
smeo04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124386282 (sqstm1)
04137 Mitophagy - animal
124386282 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
124386282 (sqstm1)
04218 Cellular senescence
124386282 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124386282 (sqstm1)
03029 Mitochondrial biogenesis [BR:
smeo03029
]
124386282 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smeo04147
]
124386282 (sqstm1)
Membrane trafficking [BR:
smeo04131
]
Autophagy
Mitophagy
Cargo receptors
124386282 (sqstm1)
Pexophagy
124386282 (sqstm1)
Aggrephagy
124386282 (sqstm1)
Xenophagy
124386282 (sqstm1)
ER-phagy
ER-phagy recepters
124386282 (sqstm1)
Other autophagy associated proteins
Midbophagy
124386282 (sqstm1)
Mitochondrial biogenesis [BR:
smeo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
124386282 (sqstm1)
Exosome [BR:
smeo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124386282 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Myc_N
Motif
Other DBs
NCBI-GeneID:
124386282
NCBI-ProteinID:
XP_046705978
LinkDB
All DBs
Position
5:complement(9306097..9309947)
Genome browser
AA seq
458 aa
AA seq
DB search
MSVTVKAYLLGKEDNHKEIRRFAVDHNVSTSFEYLSRKVMDVFSNLHNVSFQMHYKDEDG
DMIAFSSDDELIMGLTMIKDDTFRIFIKEKKEHKREFPHHMDQGFTIPPPFGPHHMGPPG
HPPMGPPHMGPPPHFPPMVHPGVTCDGCEGQVVGTRFKCNECPNYDLCSTCQAKGLHKEH
VLQPILHPMVNMYEWLPRGKIWRKMRHCMWAGAQAQAQAQACAQARAQAQARPDPSDCQP
GSQQANSQEGQAENEVSSAQSNMEYLKNIGEGVAALLSPLGIDVDIDVEHEGKKAKVTPP
PSASSGPPSGRSDASSAGLSKGTDGSPSSVGSCNGAAKDQKDQNNDEEWTHLSSKEVDPS
TGELQSLRMEVDAANDNSAPLSNNSKVTPGPSGLREAAIYPHLPQDADPHLVESLSQMLS
MGFTDEGGWLTRLLHTKNYDIGAALDTIQYAKAPDQRN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgacggtgaaggcttacctcctgggcaaggaggacaaccataaggaaattcga
cgcttcgcagtcgatcataatgtctcgacaagtttcgagtacttaagccggaaggtgatg
gatgtgttctcgaacctccacaatgtttccttccagatgcattacaaagacgaggatgga
gacatgattgccttctcttctgacgatgagctcattatgggacttactatgataaaggac
gatacctttcgcattttcatcaaggaaaaaaaggagcacaagcgtgaattcccgcatcat
atggaccaagggttcaccatcccccctccttttggaccacatcacatgggtcctccagga
catcctccgatgggtccaccccatatgggaccacctcctcatttcccacccatggttcac
cccggggtgacatgtgatggttgtgagggacaagtggttgggacccgcttcaaatgcaat
gagtgcccaaattatgacttgtgctccacttgccaggccaagggcctccacaaggaacat
gttcttcagcccattcttcaccccatggtcaatatgtatgagtggcttcctcgtggcaaa
atctggcgcaagatgaggcactgcatgtgggctggggctcaggctcaagcccaggctcaa
gcctgtgctcaagcccgggctcaagcccaagcccgacctgatccatctgattgccagcca
ggttcccagcaggctaactcgcaggaaggccaagctgaaaatgaagtctcctctgcacag
tccaatatggagtacctgaagaacattggagagggtgtggctgccttgttgagcccactt
ggaatcgacgtggacattgatgtagagcatgagggaaagaaggctaaagtgacaccacct
ccttctgcctcaagtggacctcctagtggcaggagtgatgctagctctgcaggcctttcc
aagggtacagatggaagtccaagcagtgtcgggagttgcaacggggctgcaaaggaccag
aaagaccaaaataatgacgaggaatggacccatctgagctcaaaggaagtagatccatcc
acaggcgagctccagtcgttgaggatggaggtggatgcagcaaatgataactctgctcca
ctcagcaacaactccaaagttacccctggccccagtggtctacgtgaggctgccatttat
ccacatctaccacaagatgctgaccctcatctggtagagtctctgtcccagatgttgtct
atgggcttcacagatgaaggcggttggctgaccaggctgctccacacaaaaaactacgac
attggagccgctctggacaccatccagtacgccaaagccccggaccaacgaaactga
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