Silurus meridionalis (southern catfish): 124387127
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Entry
124387127 CDS
T08004
Symbol
itcha
Name
(RefSeq) itchy E3 ubiquitin protein ligase a
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04120
Ubiquitin mediated proteolysis
smeo04144
Endocytosis
smeo04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124387127 (itcha)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124387127 (itcha)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124387127 (itcha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smeo04131
]
124387127 (itcha)
04121 Ubiquitin system [BR:
smeo04121
]
124387127 (itcha)
Enzymes [BR:
smeo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124387127 (itcha)
Membrane trafficking [BR:
smeo04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124387127 (itcha)
Ubiquitin system [BR:
smeo04121
]
Ubiquitin ligases (E3)
HECT type E3
124387127 (itcha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
124387127
NCBI-ProteinID:
XP_046707212
LinkDB
All DBs
Position
1:complement(15023732..15038026)
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AA seq
849 aa
AA seq
DB search
MKAQLQITVLSAKLKENKKNWFRPSPYVEVAVDGQSKKTEKCTNTHRPKWKQSLTVIVTP
FSKLIFRVWSHQTLKADILLGMATLEVSETLKSNDMKIHEVIRTLPLSADTDSSDLVGDL
SVCLDGMQVDPETFASEEQKLNDLANRDSKQDTGGRSSRDSSPSSDIADDTSLPNGHAVG
STESPSTSTGALRPPRPPRPQRPPPSSHQRPNSSTASSTGSTPTHGSRGPSPDSSPRPCV
NGEAANQGSNSGSGSALTVSPTPRQVSPINNGPLPPGWEQRVDQNGRIYYVDHIEKKTTW
ERPDPLPPGWERRVDTMGRVYYVDHISRSTTWQRPTAESVRNYEEWQSQQNQLQGAMQQF
NQRFIFGLQDQLGPTPNKEFDPLGPLPQGWEKRTDANGRMYFVHHPTRTTQWEDPRTQGL
LNEKPLPEGWEMRFTVDGIPYFVDHNRRATTYIDPRTGKSSLENGPQITYVRDFKAKVHY
FRFWCQQLAMQQHIKIHVSRKTLFEDSFQQIMSFHPQDLRRRLWIIFPGEEGLDYGGVAR
EWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASSINPDHLKYFKFIGRFIAMALFHGKF
IDTGFSLPFYKRILNKPLALKDLESIDPEFYNSLIWIKENNLEECGLEMYFSVDKEILGE
ITTHELKPDGGNILVTEENKEEYIRMVAEWRLSRGVEEQTQAFFEGFNEVLPQQYLQYFD
AKELEVMLCGMQEIDLSDWQKNTIYRHYARSSKQIVWFWQLMKEMDNEKRMRLLQFVTGT
CRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLMFAI
EETEGFGQE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcccaattacagataacagttttgtcggctaagctgaaagagaacaagaagaac
tggttcaggcctagtccgtatgtggaagtagctgtagatggtcagtcaaagaaaacagag
aagtgcaccaacacacacagacccaaatggaagcaatcactcacagtaattgttaccccg
ttcagcaagttaattttccgcgtctggagtcatcaaactctcaaagcagatatactgttg
ggaatggcaactttagaagtcagtgagaccctcaaatccaatgacatgaagatccacgag
gtgatacggactctccctctgagtgcagacacggacagcagtgacttggtgggagatctg
tctgtgtgtctggatggaatgcaggtggatcctgaaacatttgcttcagaggaacagaag
ctcaatgatctagcaaatagggactctaagcaagatactggaggaagatcgagtcgagat
tcctcaccctccagtgatattgccgatgatacttctctgcccaatggtcatgctgtggga
agtacagagtctccctcaacttccacaggagctctgcgacctccaaggccccccagaccc
cagagaccacctccttcctcccaccaaagaccaaactcctccacagcttcctctactggc
tctactccaactcatggcagtcgtggtccaagtccagactcatccccgcgcccatgtgtg
aatggagaggcggcaaaccagggatcaaactcgggttcagggtcggctctgacagtaagc
cccactccccgccaagtgtcccccatcaacaacggcccccttcctcctggctgggaacag
agagtggatcagaatggtcgtatctactatgtggatcacattgagaaaaagaccacctgg
gagaggcctgatcctttgcctccgggctgggagcgtcgtgtggacacgatgggcagagtg
tattatgtggatcacattagccggagcacgacatggcagcggcccactgcagagtccgtg
aggaattatgaggagtggcagagccagcagaaccagttacagggagccatgcaacagttc
aaccagagatttattttcgggctacaggatcagctagggccaactcctaataaagagttc
gatccactgggtcctttaccacagggctgggaaaaacgaactgatgcaaacgggagaatg
tattttgttcatcatcctacacggacaacacagtgggaggatcctcgtactcaagggttg
ctgaatgaaaagcccctgccagaaggttgggagatgaggttcactgtggatgggattcca
tattttgttgaccacaacaggagagcgaccacctacattgacccccgcacaggcaaatcg
tctcttgaaaatggacctcagattacttatgtgcgcgactttaaagccaaggtgcactat
ttccgcttctggtgtcagcaactagcaatgcagcagcacatcaaaattcacgtcagtcgc
aagacactatttgaggattcgtttcagcagatcatgagcttccacccgcaagatctgagg
cgcagattatggatcatctttccaggagaggagggattggactatggaggagtagctagg
gaatggtttttcctgttgtctcatgaagttttaaaccccatgtactgtctttttgaatat
gcgggtaaagacaactactgtctgcagatcaaccctgcctcatccatcaacccagaccac
ctcaaatatttcaagttcattggaagatttattgccatggctctgtttcatggcaaattc
atagacaccggcttctctctgcccttttataagcggatcttgaacaagcctctggctctg
aaagacctggaatccattgaccctgagttctacaactccctaatctggatcaaggagaat
aacctggaggagtgtgggctggagatgtatttctcagtggataaggagatcttgggtgag
atcactactcatgagctgaagccagacggaggaaacattctcgtaacagaggaaaataag
gaagaatatatcaggatggtggcagagtggagattatccaggggggttgaggaacagact
caagctttctttgaaggttttaatgaagtcttgcctcagcagtacctgcagtacttcgat
gccaaagagctggaggtgatgctgtgtggaatgcaggagatcgatctttcagactggcag
aagaacacaatctacagacactatgctcgtagcagcaagcagatcgtctggttctggcag
ctcatgaaagaaatggacaacgagaagaggatgcgtttgctacagtttgtgactggtact
tgcaggcttcctgttggggggtttgctgacctcatggggagcaatgggccgcagaagttc
tgcattgagaaagtgggaaaagaaaactggcttccacggagccacacatgtttcaaccgt
ttggatctgcctccctataagagctacgagcagctcaaagaaaagttgatgtttgctatc
gaggagacggaaggctttggccaagaatga
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