KEGG   Silurus meridionalis (southern catfish): 124387216
Entry
124387216         CDS       T08004                                 
Symbol
mycb
Name
(RefSeq) transcriptional regulator Myc-B
  KO
K04377  Myc proto-oncogene protein
Organism
smeo  Silurus meridionalis (southern catfish)
Pathway
smeo04010  MAPK signaling pathway
smeo04012  ErbB signaling pathway
smeo04110  Cell cycle
smeo04218  Cellular senescence
smeo04310  Wnt signaling pathway
smeo04350  TGF-beta signaling pathway
smeo05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:smeo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    124387216 (mycb)
   04012 ErbB signaling pathway
    124387216 (mycb)
   04310 Wnt signaling pathway
    124387216 (mycb)
   04350 TGF-beta signaling pathway
    124387216 (mycb)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    124387216 (mycb)
   04218 Cellular senescence
    124387216 (mycb)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124387216 (mycb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smeo03000]
    124387216 (mycb)
   03019 Messenger RNA biogenesis [BR:smeo03019]
    124387216 (mycb)
Transcription factors [BR:smeo03000]
 Eukaryotic type
  Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
   Cell cycle controlling factors, Myc
    124387216 (mycb)
Messenger RNA biogenesis [BR:smeo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     124387216 (mycb)
SSDB
Motif
Pfam: Myc_N HLH Myc-LZ CENP-B_dimeris Sigma70_ner eIF3h_C GOLD_2 Sporozoite_P67 ToMV_Hel_N PTPRCAP
Other DBs
NCBI-GeneID: 124387216
NCBI-ProteinID: XP_046707376
LinkDB
Position
6:complement(8973104..8975433)
AA seq 400 aa
MAVIMPLNVASKNYDYEYDSYQPYFYYDNEDEDFYTQQQQHGQPPAPSEDIWKKFELLPT
PPLSPSRRSSFSSSFPSTADQLEMVTEFLGDDAVNQSFICDSDSSQSLLKSIVIQDCMWS
GFSAAAKLEKVVSERLASLRAARKASPPPPKSECAADTNAACYLQDVHVNSVSECIDPSV
VFPYPLTECVKLKECESSLMDTPPNSGSSSSSDSESDEEDDDEEDEDDDEEEEDEEIDVV
TVEKRKSAKKCESSPVVLKRCHVTSQQHNYAAQPCARPEQPAVKRLRFDTGGGGGARGHR
PSRKCASPKTSDSEDNDKRRTHNVLERQRRNELKLSFFALRDEVPAVANNEKAAKVVILK
KATEFIVGLQTDERKLQHSKEQLRRKCEQLKRRLEMLSSS
NT seq 1203 nt   +upstreamnt  +downstreamnt
atggcagtcatcatgccgctgaacgtggccagcaagaactacgattacgagtatgactcg
taccagccctacttctactacgacaacgaggatgaggacttctacacgcagcagcagcag
cacggccagccgccggctcccagcgaagacatctggaagaagttcgagctcctgcccacg
cctcctctgtccccgagccggcgctcgtccttctccagctcgttcccgtccaccgccgac
cagctcgagatggtcacggagttcctcggcgacgacgcggtcaaccagagtttcatctgc
gactcggactcttcgcagtcgctcctcaagtcgatcgtcatccaggactgcatgtggagc
ggcttctccgcagcggccaagctagagaaggtggtgtccgagcgcctcgcgtcgctccgc
gcggcccggaaagcctcaccgcccccgcccaaaagcgagtgcgccgcagacacgaatgcg
gcgtgctacctgcaggacgttcacgtgaactctgtctctgagtgtatcgatccctccgtg
gtgtttccctacccgcttacggagtgcgtgaagctgaaggagtgcgagagctccctgatg
gacacgccgcccaacagcgggagcagcagcagcagtgacagcgagtccgatgaggaagac
gacgacgaggaggatgaggatgatgatgaggaggaggaagacgaggagattgacgtcgta
acggtggagaaaaggaaatctgccaagaagtgcgagtcgagcccagtggtgctgaagcgg
tgccacgtgaccagccagcagcacaactacgcggcgcagccgtgcgcgcggcccgagcag
cctgcagtcaagcggctccgcttcgacaccggcggcggcgggggcgcgcgggggcacagg
ccgagccgcaagtgcgccagtcctaagacgtcggactccgaggacaacgataaacggcgg
actcacaacgtgctcgagcggcagcggcgcaacgagctcaagctgagcttcttcgcgctg
cgcgacgaggtaccggcggtggcgaacaacgagaaggcggccaaggtggtgatcctgaaa
aaggccacggagttcattgtaggactgcagaccgacgagcgaaagctccaacactccaag
gagcagctcaggaggaagtgcgagcaattaaaaaggagactagaaatgctgagcagctcc
tga

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