Silurus meridionalis (southern catfish): 124387441
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Entry
124387441 CDS
T08004
Symbol
tnfsf12
Name
(RefSeq) tumor necrosis factor ligand superfamily member 12 isoform X1
KO
K05474
tumor necrosis factor ligand superfamily member 12
Organism
smeo
Silurus meridionalis (southern catfish)
Pathway
smeo04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
smeo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
124387441 (tnfsf12)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
smeo04052
]
124387441 (tnfsf12)
Cytokines and neuropeptides [BR:
smeo04052
]
Cytokines
Tumor necrosis fators
124387441 (tnfsf12)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
C1q
Fusion_gly
ZapG-like
FtsL
Motif
Other DBs
NCBI-GeneID:
124387441
NCBI-ProteinID:
XP_046707763
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Position
6:complement(14251960..14259448)
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AA seq
271 aa
AA seq
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MVKLQQQQQQQPCVTMHRIVQRRRAGPLRSAWSLLGAVALALAASSAVFTAWTWRQTRDL
TRSVQNLRERLDQVNLQRKAIVQLFLEKRELLESLRVKREAGWGKRKNGRKVASHFETGG
AKGKNGNGRKVASHFEITKDSFKTVGNEGIIKGWTEQYLNMTQAVEYNTETGTFKVVRRG
VYFLYCQVHFSEQESQYVKLEVTVPQGPSLQCMEGYSTTPTTGFKQFHFLKPCQVSGLLL
LEKGAELKTVTGSRFTLQDTGKHYFGLFKVN
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagttgcagcagcagcagcagcagcagccgtgcgtgacaatgcatcggatagtg
cagaggaggcgcgctgggccgctccgctccgcgtggtcgctgctgggtgccgtggcgctc
gcgctcgccgcctccagcgccgtgttcaccgcgtggacgtggcgacaaacccgagacctg
accaggtccgtccaaaatctgcgcgagcgcttggatcaggtgaatttgcagcgcaaggct
attgtccagcttttcctggagaagagggagctgctggagagcctgcgagtgaagagagaa
gctggatggggaaaaagaaaaaatggaaggaaggtggcctctcacttcgagactggaggg
gcaaaaggaaaaaatggaaatggaaggaaggtggcttctcactttgagataaccaaagat
tcctttaaaacagttgggaatgagggaatcattaaagggtggactgagcagtacctgaat
atgactcaagccgtggagtataacacagagaccggcacttttaaagtagttcggaggggt
gtctacttcctttactgtcaagtgcatttcagtgagcaagagagtcagtatgtgaagctg
gaagtgactgtccctcagggtccctcacttcagtgcatggagggatacagcaccactcca
accacagggtttaaacagttccacttcctgaagccgtgccaggtgtctggcctcctgctc
ttagagaaaggtgccgagcttaagactgtaaccggaagtcgttttactctgcaggataca
ggcaaacattactttggcctctttaaggtgaactag
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